Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN41744

FASTA Sequence
Unigene ID: UN41744Length: 1675 SSR 
CGAAACTTTATTTAACTGAGTTTTTAAGTGCAAATTGTATTTTTACACAAAAATGACAAGAAAGAAGATCAAACCTTGGAGAATCA
TGTCACACGATAATATTTGGTTTGTATATATAGATACATTTCTTGATCATTAAACCCTGCACTTACTTACTCATAACTAAGTTGAG
ATTATTAAACGAAAGTAGCTGAACTAAGCAGCATAAGTTTGCTTCAAATACTCTATGATTTCTGCACTCTCAAACATATTTACTCC
AGTGTTTGGATCTTCCAGGTAAGGCACCTGAAAGTGACCAGCTTTCATAAGCAATTCCTGCCGTTTGGGACTACCACGAGCACAGC
TGCGTTGAATGTGTGGCAACTCGAGTTCCACAAGAACTTCGCGTACAAGCTTGCAAAACGGAGAACCCTCGTATGCCCAGAATACG
AGTGGATTAGGTGGTAGTTTTGCTGGTGTGTACAAGTTACCCTTTCCTAGACGTCCAATCGTTGCCAAGGCAGCTGTTATAGCCGT
TAATGGACCAAGTGATAGGCTTAAAGGAACTGTTCCATCTCCATATTTCTCGGATAGATATTTGATGATTCCATCTGATTCATACA
TGGACACTCCGGTGTTTGGATCAACCTATTATTAAAAGAGACATTGTATGTTTCAACACTGAATTTTTTAACAAAAACTCATTTCC
TACTGACTAAAGTGGTGATACATAAGTTTCTAGTTATGCCTATCGGTTTAAAAATGAATATAAATTCTAAGATTTTTTGAGAAGTT
CATGAGCAAAAAAGACTTGTGTTTACATAGATGTCTACTTGAACCACATTTCAGCGAACTCGAAGCAAGGAAGGAATACATCAGGG
CAAAGCCAATTAGTTTCAATGATGGCTTTGGTGGGTAAAATAAACATAAAAAAGACTAAAATCATTAAGATAGAAAAGGCAAACCA
TGTAGGGAAACTGTAGTTTGCCACCCATCTGGTTAACCATGGGGCGAAAATTAGGACTCCCTCTTGGGCAAGGATAGTAGAGAATA
TCAAGATCCAACACTGTGACCATCTCCCTGACCTTCCGGCAAAAGGGACAGCTTTATCCTCATATCCGGAAACAGAACGAAAAAAA
GAAAACATTCAAGAGATAATATGAAAGAAACAAAAACAGTCTAAATGAAACACATACATTCAAAAATATAGAGCATAAGTACATAC
CCTTCAAACTCATATATCTCAATGGGTTTCTGAGGACGAGGCCCGAGCTTTGACGTTTCCTTCACCGTGATCCCGCCAATTCGCAA
CGCATACTGATCAGTTGGGATCACGTCCTTGGACACGAAAGAAGCAGAGTACCTTACCAGAAACGAACACTCCAGTGCCGAATCGG
AGAAGCACTCCGATAGCTGCACCCAACACATCTAATAGCTTCCCCGGTTTAACGGCGAACCGCTTCGGCTCGGGAGGCTTGAAACC
GGGAGGTGCGGTGAATTTGGTGGACACTGAGAGGGAGTCGGAAGGTTCGGAGGAAGCTTTGGACATGACTAGTAGGGTAGTTCTTC
GGATTGATCTGCTGCTTCGAGAAGAAGAAACCGGAAGGAAGCTCGGAGGTTTAGGAGGGAGGAGGAGGAGACTGTTGGCAAGCATC
ATCATCCCCGCCATCCACTTCTCTCTCTCTCTTCTCGTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAB85508 putative protein [Arabidopsis thaliana]6871e-069
NP_568128 thioredoxin family protein [Arabidopsis thaliana]6871e-069
XP_002873122 hypothetical protein ARALYDRAFT_487166 [Arabidopsis lyrata subsp. lyrata]6871e-069
AAM65224 unknown [Arabidopsis thaliana]6816e-069
XP_002309428 hypothetical protein POPTRDRAFT_416266 [Populus trichocarpa]5893e-058

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q940I2 Putative uncharacterized protein MED24.186878e-070
Q9LZC1 Emb|CAB85508.16878e-070
Q8LAP7 Putative uncharacterized protein6814e-069
B9HC92 Putative uncharacterized protein (Fragment)5892e-058
C5YN74 Putative uncharacterized protein Sb07g0241705811e-057

Arabidopsis top hits (Blast detail)Scoree value
AT5G03880.1 electron carrier6883e-072
AT4G10000.1 electron carrier/ protein disulfide oxidoreductase2798e-025
AT4G10000.2 electron carrier/ protein disulfide oxidoreductase2798e-025

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  67%
 
81  33%

Unigene MembersMember information