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Information for unigene UN41755
| FASTA Sequence |
| Unigene ID: UN41755 | Length: 672 |
SSR | | AAACTGCAGCGATTTCCGAGTCAGAAGCATGAGAAACTGCAGCTGATTCTGAGTCAGCAGCACCGGAAACTGTAGCAGTTGCTGAG
ACAACAGCACATGTGGATGGACCAGTGACAGAGACAGTATCTGAGCCTCCTGTTGTCGAGGAAACTCCTTCGGAAGAAAAAAGCGA
TCCGTCTTCAACTCCAAACACAGAAACAGCTATAGCCGCCACAGAAGGTAATAGCCAAACAATGCCGCAGCCACCCCCGCCTGAAC
CCGTTACAACAACAGTGAAACCAACAGAGAATGCAGCAACGGGGAGGCAACAAGTAACCTATCCTCCAATAAGAAGCCAACCAATT
GACTTTGGTTTCTAGGATGGCTGGCTAAAGCCAAGCTTGCACAGAAGATCACAAAACTAAAGACAACGGGTGTGTATATCTTTTTA
GATATACATCCATAATCAAAGCTTTGCGGCCATGTTGACTAGAGGAAGAAGAAGAAGAAGATGCTATTCATCACAGTATCTGTGTG
TTTTAATCTAGCCCTATTATGTAATGTGTCATTTTCGTTTTCGTATTTGTTGGTTTGTATTATTACTAAACAGAACAAAAGAAAAA
ACTCTCTGAGGATACGTCTGTGTGAAGCGTGTAAACTGATGGAAAGAGATTTGATTTTTGATAAAAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002874217 hypothetical protein ARALYDRAFT_489332 [Arabidopsis lyrata subsp. lyrata] | 349 | 4e-031 |
| BAB09653 unnamed protein product [Arabidopsis thaliana] | 232 | 1e-017 |
| AAM91529 unknown protein [Arabidopsis thaliana] | 232 | 1e-017 |
| BAF01929 hypothetical protein [Arabidopsis thaliana] | 232 | 1e-017 |
| NP_197859 transducin/WD40 domain-containing protein [Arabidopsis thaliana] | 232 | 1e-017 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WLS8 Putative uncharacterized protein At5g24710 | 232 | 1e-017 |
| Q8L7Q1 Putative uncharacterized protein At5g24710 | 232 | 1e-017 |
| Q9FIR4 Genomic DNA, chromosome 5, P1 clone:MXC17 | 232 | 1e-017 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G24710.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like (InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like (InterPro:IPR015943); Has 46946 Blast hits to 23834 proteins in 1336 species: Archae - 160; Bacteria - 9572; Metazoa - 15324; Fungi - 6794; Plants - 1938; Viruses - 1106; Other Eukaryotes - 12052 (source: NCBI BLink). | 250 | 5e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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