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Information for unigene UN41771

FASTA Sequence
Unigene ID: UN41771Length: 1340 SSR 
GGGGAGAGCGGCGATGTTGTGGGAATCGGAGATTACGACGCAGAGACGAAGAGGGAGAAGCTGAGATCGTCGCTCTCTCAACTTCT
CGCCGATCCGATTCTCGCCGACGTTCCGAGGAATCCAACACTGTCGGATGTCGTCACTCTCGTCAGCCTTGAAAAGGGAAGCGCTA
TGCGACTCTCCACCGTCAAACTCGACGGCTCCTCCTTGGGTATATATATATACCCCTTCACATGGGCATTTAGTCGGACAAGTGGT
GTGCATTTACGTTTTTCTTCTTCTCGGCAGATGTGGCGGTCATGAATTCAGCTACTTTGAAGGATCTGAAGCTTTTGATCAAGAAG
AAAGTTAATGAGATGGAGCAAGCAAACATGGGTCAACGCCACATCTCTTGGAAGCATGTATGGTCAAACTTCTGTCTTTCATGTAA
TAACGAGAAGTTGCTTGACGATGACGCAGTTCTTCAGGATGTCGGAGTTCGAAATAACTCTCAGATCGCATTTGTTCCATATGTGA
CGAAGAAAGGTCCGGGAAGACACTCGAAGAGGAAGAGGCATCGTCTCTTTCGTTCACTCCACAAGACTTGTTAGATAGTAACGGTA
GGTTTTCGACCAAACATAGTTATGTCATTCAACACTTGAGCTGAAAAATTGAGGTCACTAGATACATTTCAAAAGCGATTTATGGT
TTCAACTTCTTTTTTTTTGAGACGTTAGGTCTGATATGTTTTTGAAACTATGTCAAGATTCCCTGTGATGAAAGTTTTAGTAATCT
GTAACGGTGAGAAAGTGGGGCTCCCTCTTGGATTACTTTACCCATGGAGGTTTTAGAGGAACCATTGCTGTAGATTCTTGGCAACT
TCTGAGGGTTGGTTCTTTCTTTTAACTGTTTTCTTGAGATTCGCTGACATTGAACTAGACGTCTTTTCCTTTTTATTTTTTTTTAT
TATAGGTACTTTGATTACTCAGTCTGTTACTATTAGTTGGTGGATTCTGATCGGGTTGTCAAGCATCATTAGGGCATTTTCTCACG
AACGAGAGGAAAAACAACATATTCAGTGGCAAGTTGCGATGCATCAGCATGCCGCACACACAAGCAGATTAAAGAAAAAAAGCACC
AAGTGATGATCTGGAATACTGTATGCTCTTGAGTCGTGATGCCATCAGCAGATGGTGGGATTGATCTTTATTAGAGTGTGAGTTTG
CTGGTTTAGATGATGATAATCCGGTTCGGTGTAAAACTGTATGTAAGCTGTAAATTATTGGTCGCAGTGTGCATAACAGAAATAAA
TGGTGTTATTTTCATTACTAATCCGGTAAGTAATGACACATTAATTACAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_187443 U11/U12 small nuclear ribonucleoprotein [Arabidopsis thaliana]4897e-047
XP_002882553 hypothetical protein ARALYDRAFT_478124 [Arabidopsis lyrata subsp. lyrata]4808e-046
AAF21196 unknown protein [Arabidopsis thaliana]4484e-042
ADN34128 hypothetical protein [Cucumis melo subsp. melo]3688e-033
XP_002285907 PREDICTED: hypothetical protein [Vitis vinifera]3661e-032

Swiss-Prot top hits (Blast detail)Scoree value
Q9BV90 U11/U12 small nuclear ribonucleoprotein 25 kDa protein1515e-009
Q8VIK1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein1499e-009
Q3ZBQ4 U11/U12 small nuclear ribonucleoprotein 25 kDa protein1481e-008

TrEMBL top hits (Blast detail)Scoree value
Q84WS8 At3g078604895e-047
Q9SFC8 F17A17.20 protein4483e-042
C6TC93 Putative uncharacterized protein3642e-032
B9GQ62 Predicted protein3426e-030
C5Y9Y6 Putative uncharacterized protein Sb06g0318703202e-027

Arabidopsis top hits (Blast detail)Scoree value
AT3G07860.1 unknown protein4893e-049
AT4G32270.1 unknown protein1319e-008
AT4G32270.2 unknown protein1282e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  100%

Unigene MembersMember information