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Information for unigene UN41779
FASTA Sequence |
Unigene ID: UN41779 | Length: 712 |
SSR | | GGACTTTGAAACTGTGTTTGCATGCAACTCTCTTGATGTGAATATTATCTCTCAATTTTGTGTGGTATACAAATTGCTTTCCTAAA
AATCCTTTTTTGCATTTCCAACCTCTCTCTGCGTTTCACATGGCTTCTTCTTCTTCTTCTCCAGTGATCATCAATTGTGCACACGA
TGTATTCCTCAGTTTCAGAGGACACGACGTCCGCCGTAAGTTCCGTTCCCACTTTCTCAAGGAGCTCGACCGCAAGGTAATCACCT
TCAAGGACGATGAGATGGAAAGAGGCCAATTTATTGCGGATGAGCTTATCAAGGCCATACAAGGATCCAGGATTTCAGTTGTAGCG
TTTTCCGAAAACTTTGCAAATTCGAGCTGGTGTTTGGATGAGTTAGCCGAGATCATGAGGTGCAGAGAGGAACGAGGCCAAATCGT
GATACCCATTTTTTACGAAGTGGATCCTTGTCATGTCAGGTATCAAACCCACGTTTTCGGAGAGATCTTTGAAAAGACTTGGGAAG
ACATAGAGGAGGAAAAGAAACATATGTGGCGACAGGCTTTGACCCCCGCAGCCAACATAGCTGGAGAGGATTCTCGAAACTGGTAG
GGTTGTTCGTTTGTCAACTCCATCAAGATTCTCCATTTACATAAATGATCTCTCCAGATATTATTGGGACTATTCATTTGTGCATC
TAGATGAATATTTTAATTGGACTT
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GenBank top hits (Blast detail) | Score | e value |
NP_199457 TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana] | 451 | 7e-043 |
XP_002865185 predicted protein [Arabidopsis lyrata subsp. lyrata] | 451 | 7e-043 |
XP_002865184 predicted protein [Arabidopsis lyrata subsp. lyrata] | 446 | 3e-042 |
XP_002865187 predicted protein [Arabidopsis lyrata subsp. lyrata] | 444 | 4e-042 |
XP_002863749 predicted protein [Arabidopsis lyrata subsp. lyrata] | 437 | 3e-041 |
Swiss-Prot top hits (Blast detail) | Score | e value |
O82500 Putative disease resistance protein At4g11170 | 412 | 1e-039 |
Q40392 TMV resistance protein N | 329 | 4e-030 |
Q9C5Q9 Protein PHLOEM PROTEIN 2-LIKE A5 | 215 | 7e-017 |
Q9FHE9 Protein PHLOEM PROTEIN 2-LIKE A8 | 196 | 1e-014 |
Q9FHE8 Protein PHLOEM PROTEIN 2-LIKE A6 | 188 | 1e-013 |
TrEMBL top hits (Blast detail) | Score | e value |
Q9FHG0 Disease resistance protein-like | 451 | 5e-043 |
D1GEE3 Disease resistance protein | 440 | 9e-042 |
D1GEH5 Disease resistance protein | 433 | 6e-041 |
Q9FNJ2 Disease resistance protein-like | 427 | 3e-040 |
A7LKN1 TAO1 | 426 | 4e-040 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G46450.1 disease resistance protein (TIR-NBS-LRR class), putative | 451 | 3e-045 |
AT5G22690.1 disease resistance protein (TIR-NBS-LRR class), putative | 427 | 2e-042 |
AT5G44510.1 TAO1 (TARGET OF AVRB OPERATION1); ATP binding / protein binding / transmembrane receptor | 426 | 2e-042 |
AT5G46470.1 disease resistance protein (TIR-NBS-LRR class), putative | 421 | 9e-042 |
AT1G69550.1 disease resistance protein (TIR-NBS class), putative | 414 | 6e-041 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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