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Information for unigene UN41779
| FASTA Sequence |
| Unigene ID: UN41779 | Length: 712 |
SSR | | GGACTTTGAAACTGTGTTTGCATGCAACTCTCTTGATGTGAATATTATCTCTCAATTTTGTGTGGTATACAAATTGCTTTCCTAAA
AATCCTTTTTTGCATTTCCAACCTCTCTCTGCGTTTCACATGGCTTCTTCTTCTTCTTCTCCAGTGATCATCAATTGTGCACACGA
TGTATTCCTCAGTTTCAGAGGACACGACGTCCGCCGTAAGTTCCGTTCCCACTTTCTCAAGGAGCTCGACCGCAAGGTAATCACCT
TCAAGGACGATGAGATGGAAAGAGGCCAATTTATTGCGGATGAGCTTATCAAGGCCATACAAGGATCCAGGATTTCAGTTGTAGCG
TTTTCCGAAAACTTTGCAAATTCGAGCTGGTGTTTGGATGAGTTAGCCGAGATCATGAGGTGCAGAGAGGAACGAGGCCAAATCGT
GATACCCATTTTTTACGAAGTGGATCCTTGTCATGTCAGGTATCAAACCCACGTTTTCGGAGAGATCTTTGAAAAGACTTGGGAAG
ACATAGAGGAGGAAAAGAAACATATGTGGCGACAGGCTTTGACCCCCGCAGCCAACATAGCTGGAGAGGATTCTCGAAACTGGTAG
GGTTGTTCGTTTGTCAACTCCATCAAGATTCTCCATTTACATAAATGATCTCTCCAGATATTATTGGGACTATTCATTTGTGCATC
TAGATGAATATTTTAATTGGACTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_199457 TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana] | 451 | 7e-043 |
| XP_002865185 predicted protein [Arabidopsis lyrata subsp. lyrata] | 451 | 7e-043 |
| XP_002865184 predicted protein [Arabidopsis lyrata subsp. lyrata] | 446 | 3e-042 |
| XP_002865187 predicted protein [Arabidopsis lyrata subsp. lyrata] | 444 | 4e-042 |
| XP_002863749 predicted protein [Arabidopsis lyrata subsp. lyrata] | 437 | 3e-041 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O82500 Putative disease resistance protein At4g11170 | 412 | 1e-039 |
| Q40392 TMV resistance protein N | 329 | 4e-030 |
| Q9C5Q9 Protein PHLOEM PROTEIN 2-LIKE A5 | 215 | 7e-017 |
| Q9FHE9 Protein PHLOEM PROTEIN 2-LIKE A8 | 196 | 1e-014 |
| Q9FHE8 Protein PHLOEM PROTEIN 2-LIKE A6 | 188 | 1e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FHG0 Disease resistance protein-like | 451 | 5e-043 |
| D1GEE3 Disease resistance protein | 440 | 9e-042 |
| D1GEH5 Disease resistance protein | 433 | 6e-041 |
| Q9FNJ2 Disease resistance protein-like | 427 | 3e-040 |
| A7LKN1 TAO1 | 426 | 4e-040 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G46450.1 disease resistance protein (TIR-NBS-LRR class), putative | 451 | 3e-045 |
| AT5G22690.1 disease resistance protein (TIR-NBS-LRR class), putative | 427 | 2e-042 |
| AT5G44510.1 TAO1 (TARGET OF AVRB OPERATION1); ATP binding / protein binding / transmembrane receptor | 426 | 2e-042 |
| AT5G46470.1 disease resistance protein (TIR-NBS-LRR class), putative | 421 | 9e-042 |
| AT1G69550.1 disease resistance protein (TIR-NBS class), putative | 414 | 6e-041 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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