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Information for unigene UN41788

FASTA Sequence
Unigene ID: UN41788Length: 775 SSR 
GACACATCAAAGCATCACACACACAAACACACACTTTCTCTTCTCTTCTTTGATCTTTCCTCTCTTCTACACATCCAAATGGCCAC
TGCTGATGTTGAACAAGTGACTCCAGCCGCAGCTGAGCACGTCGAGGTGACACCACCAAAGACAGTGGCGTCTGATGAAACCGTTG
CTGCTGCCGTTGTGGCTGACTCTGCTCCAGCTCCGGTAACAGAAACTGAAACTCCGGTGAAAGAAACAGAGGAAACCAAGACACAG
ACGGAGGAGATAAAGAAAGAGGAAGAAGCTCCTGTCGAAGTAACCACTAAAGACCTCCCTGTGGAAGAAGGTCCAGCCGCTGTGGA
GGAAGAGAGCAAGACAGAGGAAGTCGTAGAGCCCAAGAAAGAGGAAGAAGTAGAAGAAACAAAGACAGAGGAAACTCCAGCGGTTG
TTGAGGAAGAGAGCAAAACAGAGGAAGTTGTAGAGCCCAAGAAAAAGGAAGAAGCACCGGCTGTTGTGGAGGAAGAGAAGAAGCCA
GAAGCAGAGGAGGAGGAGAAAACCACTGAAGTAGCCGCCGTCCAAGCCGCCGCAGCTCCAGCAGATGTTGCCGTGGAGAAGGCTGA
TGAGTAAATCTGAAAGAAGAAGAAGAAGTACACTATTTGCTACTTTTTAAAAAAAGTACGTTGCGTCTTTGCTTTGTTGTTCTGAG
TCTGTCACTCTTGTCCCTTTTTGTATCACCCTCTCTTTTTAAGTTTCTATCTTCCATATGTTTAATATAAATTAAAAATCATCTTT
G

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAA99394 vacuolar calcium binding protein [Raphanus sativus]6784e-069
AAM63945 unknown [Arabidopsis thaliana]3146e-027
NP_564795 Vacuolar calcium-binding protein-like protein [Arabidopsis thaliana]3138e-027
XP_002888024 hypothetical protein ARALYDRAFT_475097 [Arabidopsis lyrata subsp. lyrata]3111e-026
XP_001747362 hypothetical protein [Monosiga brevicollis MX1]2062e-014

Swiss-Prot top hits (Blast detail)Scoree value
Q75JC9 Uncharacterized protein DDB_G02716701862e-013

TrEMBL top hits (Blast detail)Scoree value
Q9LRH2 Vacuolar calcium binding protein6783e-069
Q8LBZ8 Putative uncharacterized protein3144e-027
Q9SXE9 At1g62480/T3P18_43136e-027
A9V3K4 Predicted protein2061e-014
A9UUV5 Predicted protein2052e-014

Arabidopsis top hits (Blast detail)Scoree value
AT1G62480.1 vacuolar calcium-binding protein-related3295e-031
AT1G12080.2 unknown protein2051e-016
AT1G12080.1 unknown protein1682e-012
AT1G72150.1 PATL1 (PATELLIN 1); transporter1503e-010
AT5G44610.1 MAP18 (Microtubule-associated Protein 18); microtubule binding1451e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  100%

Unigene MembersMember information