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Information for unigene UN41891
| FASTA Sequence |
| Unigene ID: UN41891 | Length: 1168 |
SSR | | GAAACTGAAAAAACCAAAGGCTTGGAACATACTTATGGCGTCTGTAAATCTTTTTTTCTGGTCAACGGTATGGTGTCTGTAAATCT
AAGACAGAAAAATACATAGAAAGGTTTCACAAAACTGAACAGTCATCTCTCTGCCATCAACAACTCTTCCTGAAACAAAAAAGGTT
CCATCTTTCAAAATCTAATCACCCACTAAGAACCGTTGGATCAGAACTAGCTGAGATCTTTCTTGCTCTGAGTAAGCGTCTATTAC
CATTGGCATCGAGTTAAATGTGTCACAAGTGCAACTATGTTGTCCTTCTCTGACACTGCTCCACAACAGTAGAAAAGCTCATGCCC
ACACCTAACCAAGCGATGCAATGATCTGGATATCTTTCATCAACCGGAAGAATCTGAAACTCCTCAAAGCTCACAGAATCATGCCA
AGGAACATCACAGTCAACACACACAAACCTCTCACAGAGTGGACACTTCACACAGCATATATTCTTGTCCAACACTCTGATTCTCC
GTGACTTCATCTATCAGTGCTTCTCGATCAGCAGTAACCAAACTCTTTCCGAACAAAACTATATATCCAGACTCATATAACAGTTG
GGGATGCGCTCTTCACACTTTCAAGCTTAATTGCGACCTCTTCGTTAGTCTGAACAAAAGTTCCTTAAATCACAAGTCTCAGACTT
AGTCTTTTTCCTTCCCAGATTTCTTCTAGCTTAGGAAGACCTTGGGTTGCTTAAGAAAAGCTTTCTCTGTCTGCAAGAGAGAGAGA
GAAGAGGATGAGAATATTTGTAAGAAGTATATAAACAAAGAGACAGAGAAAGAAGAAATATAACCTGTTCAACCTTGGCTACTTGC
TGTCTCTGCTCCATCTGTCTCTCCTTTATCGAATCAGAGGAGTTGGGATCTGAGGAGAAGCATGAAGGAGTGAAATTGAGGGGGTT
TCAAGGTCATACAGAGATGATTATGAGACGTAATCGTCGTTCAAGGATAGATCAAGGTTCGGGGTTTGGTGGAGCGACGATAATTG
ATTTACAGAGTGCAAAGTGGAGGAGATTGGGAAAGACGAGATCAGGGTTCCCTTGCCATCATCGTTTACTGGATTGGGATGAATAA
GAACAAAAAAAAAAACCCAAACTGAAGAAGATGGAGGATGAAGAGATTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002867925 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 214 | 5e-015 |
| NP_193702 RING/U-box domain-containing protein [Arabidopsis thaliana] | 212 | 8e-015 |
| BAF00722 hypothetical protein [Arabidopsis thaliana] | 212 | 8e-015 |
| CBI29063 unnamed protein product [Vitis vinifera] | 160 | 9e-009 |
| XP_002273428 PREDICTED: hypothetical protein [Vitis vinifera] | 160 | 9e-009 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O81849 Putative uncharacterized protein AT4g19670 | 212 | 6e-015 |
| Q0WQ77 Putative uncharacterized protein At4g19670 | 212 | 6e-015 |
| B9NA54 Predicted protein | 158 | 1e-008 |
| B9SZ17 Zinc finger protein, putative | 155 | 2e-008 |
| B9ICJ9 Predicted protein | 147 | 2e-007 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G19670.1 zinc finger (C3HC4-type RING finger) family protein | 212 | 3e-017 |
| AT4G19670.2 zinc finger (C3HC4-type RING finger) family protein | 212 | 3e-017 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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