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Information for unigene UN41892
| FASTA Sequence |
| Unigene ID: UN41892 | Length: 886 |
SSR | | GGGACGTGACCTCTCTCTCTCTTTTCCTCCATCAATGGCCACCACAAACTCTCTCCAGCATCACCACCACTCCTCTTCTTACCACC
GTCTCAATCTCCATCCCCAATCTCACTTCGCACCATCTTCTATCTCCTTCAAACACCCCACTACTTCCACCGCCACATTCTTATCA
CTCACCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCGTTGTCTCCGCCTCTCTCACAACAAACGCCTCCTCGGTAACCGCAGAAAC
CTCCAGCGAGTTCGACGTCCTAGCGACCCACCTGACCAACCAAGACTTCAGGAAAGCAGACGAAGAAACTCGCCGCCTTCTCATCC
AGATAGCCGGAGAAGCCGCGGTCAAACGCGGCTACGTCTTCTTCTCCGAGGTGAAGTCGATCTCCGTCCAAGATCTTCAAGCCATC
GACAACCTCTGGACCAAACACAGCGACGGGAGGTTCGGGTACAGCGTGCAGCGCAAAATCTGGTTAAAAGTCAAGAAAGACTTCAC
GAGATTCTTCATCAAAGTCGAGTGGATGAAGCTTCTCGATACGGAGGTGGTTCAGTACAACTACAGAGCTTTCCCCGACGAGTTCA
AGTGGGAGCTTAACGACGAAACGCCTCTTGGACACTTGCCGCTCACTAACGCGTTGAGAGGAACGCAGCTTCTGAAATGCGTTTTG
AGCCATCCTGCGTTTGAGATAGATGGTGATGACGTTGAGGAAGGGGAAGAAGCAGAGAACAGAGGTGGGGCCAAAGCACAGACCAA
AGACACGAGAGTGTTTAAAACAGATTACAGCTTCCGATGTTTTTTTTCAATTTATATTTTCTGGTAATGAATATAAAAATTATTGG
TTTATCAATGTGAAATTCATTAAGTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002878269 hypothetical protein ARALYDRAFT_486407 [Arabidopsis lyrata subsp. lyrata] | 1009 | 2e-107 |
| NP_191499 tetrapyrrole-binding protein [Arabidopsis thaliana] | 1003 | 1e-106 |
| AAL36274 unknown protein [Arabidopsis thaliana] | 1003 | 1e-106 |
| AAP88435 GUN4 mutant [Arabidopsis thaliana] | 999 | 3e-106 |
| XP_002309808 predicted protein [Populus trichocarpa] | 701 | 1e-071 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LX31 Tetrapyrrole-binding protein, chloroplastic | 1003 | 4e-108 |
| Q1XDT5 Uncharacterized protein ycf53 | 293 | 1e-025 |
| P72583 Ycf53-like protein | 248 | 2e-020 |
| Q24120 Protein cappuccino | 138 | 9e-008 |
| P21997 Sulfated surface glycoprotein 185 | 135 | 2e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q7XJ48 GUN4 mutant | 999 | 2e-106 |
| B9HH58 Predicted protein | 701 | 7e-072 |
| A5BEZ5 Putative uncharacterized protein | 685 | 5e-070 |
| B9T5C4 Tetrapyrrole-binding protein, chloroplast, putative | 684 | 7e-070 |
| B9MY30 Predicted protein | 682 | 1e-069 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G59400.1 GUN4; enzyme binding / tetrapyrrole binding | 1003 | 4e-109 |
| AT4G13340.1 leucine-rich repeat family protein / extensin family protein | 126 | 2e-007 |
| AT3G24550.1 ATPERK1 (PROLINE EXTENSIN-LIKE RECEPTOR KINASE 1); ATP binding / protein kinase | 123 | 4e-007 |
| AT3G22800.1 leucine-rich repeat family protein / extensin family protein | 114 | 5e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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