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Information for unigene UN41902

FASTA Sequence
Unigene ID: UN41902Length: 818 SSR 
ACACTCCCAACAGTACTGTCGAGCAACGCTACAGTGAGCTCGTCTCCGTCTTTTTACTCGCACTGACAGATCTGCTCTCTCCGCTG
AGGATGAGGTTGATGCTGCTTTGTCAAAGAGGAACCATTTTCAGGGTACAAGACTTGTACTTGCGTACTGGAAGTGCATTTATCTC
TTCCTCGCTCATAGAGTTTGTGGGGACATTATCAGAATCAAGTGCTCTTAGAGTTTCATAATCTAAGTTATCAAACTCCCGATCAA
GAAGAGCCAGCTGGAGCCTAAGTCCTTGAAGACGCCCTCTGGTAGCAAGAGCAATGGAGGGAGGCACATGCAGCCTGAGCTCAGTG
TGGCTGAAGAGGCCACTAGCTGCGGCAACATGAGCCTGAGCCTGAGCTTGAAGTTGTTGGCAAGTGGCATACATCCTAAGAGTCGT
CGCCATCAAAAACACCCCAAGCACAAGCCAGAGCAGGAAATTAGGAGGCATCTGATGGGAGTTGAGAATCATAAACAGCAAAAGAA
CAGTGACAAGAAAAGCGAGGGAGTTAGAGTTCACAGGTCGAGCTCCATGAACACGCATAGCTCGTCGCTCGGGTATGAATCCTGAG
AATCCGCTCTCTAAATCTCCTCTACTTCCTCGGAATACGAAACTCATCTTCCTTCTTCTTCTTCTTTGCCTCCTGGAGGGTGGAGA
ATCTACAGAATCACGGATTTTACTCTGTTATTGTATGCTGACATCGGCGGGAGAAGACGGATTCGCCGTCGGAGCGAGAGGACTCG
GGACGAGTTATCGCTCGCTATTTAATTTTTGTCGACGATATAGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878037 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]8381e-087
NP_191112 E3 ubiquitin-protein ligase SDIR1 [Arabidopsis thaliana]8075e-084
CBI31650 unnamed protein product [Vitis vinifera]7725e-080
XP_002283148 PREDICTED: hypothetical protein [Vitis vinifera]7725e-080
CAN60068 hypothetical protein VITISV_012400 [Vitis vinifera]7672e-079

Swiss-Prot top hits (Blast detail)Scoree value
Q9M2S6 E3 ubiquitin-protein ligase SDIR18072e-085

TrEMBL top hits (Blast detail)Scoree value
A5ACW5 Putative uncharacterized protein7671e-079
B9HPE3 Predicted protein7617e-079
B9T008 Protein binding protein, putative7455e-077
C6TKE4 Putative uncharacterized protein7383e-076
B9HTG7 Predicted protein7365e-076

Arabidopsis top hits (Blast detail)Scoree value
AT3G55530.1 SDIR1 (SALT- AND DROUGHT-INDUCED RING FINGER1); protein binding / ubiquitin-protein ligase/ zinc ion binding8072e-086

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  67%
 
181  33%

Unigene MembersMember information