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Information for unigene UN41992

FASTA Sequence
Unigene ID: UN41992Length: 553 SSR 
TTTTCTAGAAATAGTACATACTACTTGTTGACAACAACAACAACATGCATCTGGTCCCCAAGAAACTGAGTAAAATGACCGGAATG
CCTTTTGGTTGCAAAAAAAAAAAAAAAAAAACTAGAGAGACTAGGACCGAGGACGAAACGCGTCAAACGTCAAGCCGTGAGAAACC
CTCGTAGCAGGAGCCCACGGATTGACCGGCATCGACCTCTGGTGGTGTCCTAACGCAGCACCTTGAGGTTGTGGTTGTGGTGGTGG
TGGTGGGACCGACACGTGCTCACATGAAGGGCACATGGTCAAAGTGGTGGGTGGGTTCATGTGCATGTAGAACTGAGGAGAGAGCT
TAAGCGACCTCAGCTCCGTTACTTCTTTCTGTAGCCGACGGTTCTCTTCCGTTAGATTCTCGCAGCATCGCCTTAAGAACTCGCAG
TCAACCTCCGTCTGCTTCAGCTTTGTCCTTGCTCGTCTGTTCTGAAACCAAACTTCCACTTGTCTTGCTCTTAATCCTAGCTGCTT
AGCCAAAGCTTGCTTCTGCTTGGGGTTAAGAGTGCTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33791 unnamed protein product [Thellungiella halophila]6924e-071
NP_193411 homeobox-leucine zipper protein HAT4 [Arabidopsis thaliana]6371e-064
CAB96199 hypothetical protein [Capsella rubella]6361e-064
CAA79670 HAT4 [Arabidopsis thaliana]6342e-064
ABZ02298 HAT4 [Arabidopsis halleri]5473e-054

Swiss-Prot top hits (Blast detail)Scoree value
Q05466 Homeobox-leucine zipper protein HAT46375e-066
P46602 Homeobox-leucine zipper protein HAT34583e-045
P92953 Homeobox-leucine zipper protein ATHB-44493e-044
Q01I23 Homeobox-leucine zipper protein HOX174162e-040
Q0JB92 Homeobox-leucine zipper protein HOX174162e-040

TrEMBL top hits (Blast detail)Scoree value
Q9LEM2 Putative uncharacterized protein6369e-065
B1P474 HAT4 (Fragment)5472e-054
B1P484 HAT4 (Fragment)5472e-054
B1P489 HAT4 (Fragment)5472e-054
B1P490 HAT4 (Fragment)5472e-054

Arabidopsis top hits (Blast detail)Scoree value
AT4G16780.1 ATHB-2 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2); DNA binding / protein homodimerization/ sequence-specific DNA binding / transcription factor6591e-069
AT3G60390.1 HAT3 (HOMEOBOX-LEUCINE ZIPPER PROTEIN 3); transcription factor4583e-046
AT2G44910.1 ATHB4 (ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 4); DNA binding / transcription factor4493e-045
AT5G47370.1 HAT2; DNA binding / transcription factor/ transcription repressor4063e-040
AT4G17460.1 HAT1; DNA binding / transcription factor4029e-040

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  33%
 
102  67%

Unigene MembersMember information