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Information for unigene UN41994
| FASTA Sequence |
| Unigene ID: UN41994 | Length: 1009 |
SSR | | GTAAACAATATGCTTCCATTAATGTTTAGTAATTTTATACGTTTAATACATTCGGAATTCACGACAAAGTGTTTTAAACCTTGGAC
AAAAAAGAAAACACCACACAGTTTAGATGATACTTGAAGAAAAGATCAAACACTTACCATCCAGATCTCTCTCTCTCTCACTCTCT
CTTGAGTTTCATTGACTTCTCATCCTGCTGGTTTCTGCTGCCCTGACTTGCGCGAAGTAAGCATGCGCCATGGCTTCTTTTGCAGT
TAATCTGTCTTGATGATCATACCGGAGTAGCTTGTCCAGGAAATCAATCGCCTCGGGTGAGACTAGATGCTGATTGTCTGCGTTGG
TGAATTTGGACCAAGGCTTCCTGCTATGCCGTCCAACGAGTGCTTCGAGTTGTGGTTCAAGTTCTAACTGGTACTTATCTAGATAA
GCGTTTAAGTCATCTGTCCCAAGTACCTTGGCGATTTTCACTAGCTGATCCTGATTGTCATGGCCGTAGAAAAAAGGTTCCTTACG
GAATATCATCCCAGCAAACATACAGCCAAGGCTCCACATATCCAATGAGTAGTCATAATCTTGCAAGTCCACAAGAAGTTCAGGTC
CCTTAAAGTATCTCGACGCAACACGGACATTATACTCTTTCCCAGGGTGGTAAAACTCAGCGAGACCCCAATCTATCAGCCTAAGC
TTACGCAGCTCATGGTCAATCATAACATTGTGAGGCTTTACGTCTCTGTGCATTATCCCTTGCGAATGGCAGTAATCCAATGCCTT
CAAGAGCTCAAAGATGTAGTAACGAATGTCGTAATCAGTAAAGGTCGGATAGAGAAGTTTAAAGTCAGTGCTGTTGACATACTCGA
ATATCAAGCTCGGAGCTTTGGAATGCTCATCTCTAACAACATCAAACAGCTTCACAATGTTGGTCCCACCACACAAGTTCTGCAGT
ATCTTGATCTCTCTCCTTATCTTCTTTTTCTTAACGGGTTTGAGGATCTTAACGATGCACTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| Q08467 RecName: Full=Casein kinase II subunit alpha-1; Short=CK II | 1405 | 3e-153 |
| NP_201539 casein kinase alpha 1 [Arabidopsis thaliana] | 1405 | 3e-153 |
| BAH20017 AT5G67380 [Arabidopsis thaliana] | 1398 | 2e-152 |
| BAA01090 casein kinase II catalytic subunit [Arabidopsis thaliana] | 1384 | 8e-151 |
| BAC02728 casein kinase 2 catalytic subunit [Nicotiana tabacum] | 1382 | 1e-150 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q08467 Casein kinase II subunit alpha-1 | 1405 | 1e-154 |
| Q08466 Casein kinase II subunit alpha-2 | 1378 | 2e-151 |
| P28523 Casein kinase II subunit alpha | 1334 | 2e-146 |
| O64817 Probable casein kinase II subunit alpha | 1322 | 6e-145 |
| Q8TG13 Casein kinase II subunit alpha | 1137 | 2e-123 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DH00 AT5G67380 protein (Fragment) | 1398 | 1e-152 |
| Q70Z36 Protein kinase CK2 alpha subunit | 1382 | 1e-150 |
| Q8LP28 Casein kinase 2 catalytic subunit (Fragment) | 1382 | 1e-150 |
| Q70Z24 Protein kinase CK2 alpha chain | 1380 | 2e-150 |
| Q70Z25 Protein kinase CK2 alpha chain | 1380 | 2e-150 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G67380.1 CKA1 (CASEIN KINASE ALPHA 1); kinase | 1406 | 9e-156 |
| AT3G50000.1 CKA2 (CASEIN KINASE II, ALPHA CHAIN 2); kinase | 1379 | 1e-152 |
| AT5G67380.2 CKA1 (CASEIN KINASE ALPHA 1); kinase | 1343 | 2e-148 |
| AT2G23080.1 casein kinase II alpha chain, putative | 1323 | 4e-146 |
| AT2G23070.1 casein kinase II alpha chain, putative | 1257 | 2e-138 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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