Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN42004

FASTA Sequence
Unigene ID: UN42004Length: 976 SSR 
CTAAGCTTGAGTTCGTGCCATAAAACCAAAAACATAACTGATCATCACGTAAATAGAGGAAATCGAATATATCGATTATAGAGAAA
AAAGACATCCTAAGATAAAGTAACAAAACGATTTGATGGACGTGTACAGGAAGCAAAACAAAACCATAGTCACAGGGCTTAGGACC
GCTCTGTTTGGAAAACGTGAACTAGCAGACATTAATTCCTCGAGGAATGTATTATCTAGCAGGAGGAGGAGGAGGGCCAAGGGATT
TAGCCATGCCAACCCAAGCAACAATCCCACAAGCGAGAATGATCCAACCACATACATCGTAAGTGAAGTCGTTGTTAACCTTCTTA
TTCTTCTTCTTACCACCGCCAGCATTTGATGAAGCTGAGGGACCCCCTCCCTCCTCCACCTCCACCTAATGACTGCTGCATCATCA
TCCCATCCGCATGTATGTTCATATGCAGCGCCGGGGCCCTTGCTGTAACTTCCAAGGACTTGAGGTACATCTCATTACCTGGATCC
TCATTTTCAGCTTTTTGGAAAAAATCAGTGGCTTTATCAAAGTGAAGTTTGGCAGCATCGGGATCAGGGGTAAGGAAGGCGTGGGC
GGTGTAGGCGTTGCCAATACACCAAAGAGCCTGATGCTTCCCTGGATTTATTGTCAACACCTCTTCCAACTTTGAAACAGCATCAT
CTAACATGAGGCATCGGGAATAGCCTGAACTGAGCAAGCTCAAGTAATGCTCCACCCCACTGCAGCAGATTCTCGGAATCGAGTGG
ATCCTTAACGTACTGAGCCTCACAAGCTTTGCGAGTATGCTCGAACATCACAAGCCTTTCAAAGTCGGCGGCATTGAATTCCATCG
TGAGTTGATGATGCGGTGGGAGGAGAGGGAAAGAAAAAAAAGTTAGGGTTGGGGTTCTCTTTTTGTGTAAATTATTACAAGACCAC
CACGATACGAAAACCAAAGACCTTCTTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893465 F17L21.18 [Arabidopsis lyrata subsp. lyrata]4081e-037
NP_174059 mitochondrial import receptor subunit TOM20-2 [Arabidopsis thaliana]3821e-034
AAF99745 F17L21.18 [Arabidopsis thaliana]3821e-034
CAC14429 TOM20-2 protein [Arabidopsis thaliana]3821e-034
XP_002269795 PREDICTED: hypothetical protein [Vitis vinifera]3353e-029

Swiss-Prot top hits (Blast detail)Scoree value
P82873 Mitochondrial import receptor subunit TOM20-23825e-036
P92792 Mitochondrial import receptor subunit TOM203262e-029
P82874 Mitochondrial import receptor subunit TOM20-32697e-023
A2WYG9 Probable mitochondrial import receptor subunit TOM202482e-020
Q5JJI4 Probable mitochondrial import receptor subunit TOM202482e-020

TrEMBL top hits (Blast detail)Scoree value
C6SW69 Putative uncharacterized protein3111e-026
C6TMM7 Putative uncharacterized protein3111e-026
C6T3Y4 Putative uncharacterized protein3003e-025
B9RBI0 Mitochondrial import receptor subunit TOM20, putative2993e-025
B3TM32 Mitochondrial import receptor subunit TOM202968e-025

Arabidopsis top hits (Blast detail)Scoree value
AT1G27390.1 TOM20-2 (TRANSLOCASE OUTER MEMBRANE 20-2); P-P-bond-hydrolysis-driven protein transmembrane transporter/ metal ion binding3825e-037
AT3G27080.1 TOM20-3 (TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3); P-P-bond-hydrolysis-driven protein transmembrane transporter2696e-024
AT3G27070.1 TOM20-1 (translocase outer membrane 20-1); P-P-bond-hydrolysis-driven protein transmembrane transporter2339e-020
AT5G40930.1 TOM20-4 (TRANSLOCASE OF OUTER MEMBRANE 20-4); P-P-bond-hydrolysis-driven protein transmembrane transporter1981e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information