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Information for unigene UN42054
| FASTA Sequence |
| Unigene ID: UN42054 | Length: 494 |
SSR | | GGAGGAGAAGAGGAGAGAGAGAGAGAGAAGAAATGGCTGCTTCAGTGATGCTTTCATCGGTGACGTTGAAACCGGTGGGTTTCACG
GTGGAGAAGATGTCGGCCAGAGGTTTACCGTCGCTCGCAAGAGCTTCTCCTTATTCCTTCAAAATCGTCGCGAGCGGTGTCAAGAA
GATCAAGGGTTATGGTGTTTACAAGTTTGTTGACAAGTATGGAGCTAACGTTGATGGATACAGTCCTATCTACAACGAGGAGGAGT
GGTCAGCGAGTGGTGATGTGTACAAGGGAGGAGTCACCGGATTGGCTATTTGGGCAGTGACGCTTGCCGGAATTCTCGCCGGAGGA
GCTCTTCTTGTGTACAACACAAGCGCTTTGGCTCAGTAAATCTTTTAAAAGACATGTTTCTCTCTATGTTTTGTGTTCTCTGTTTC
TCTCTTCTCTGTAATGCTCAGAACATACTTTTGAAATTTATAAAAGAACTCTAGTGTTTGTACG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAK22270 Photosystem II 10 kDa polypeptide, chloroplast precursor [Chenopodium rubrum] | 418 | 1e-039 |
| AAO32060 photosystem II 10kDa polypeptide [Brassica rapa subsp. pekinensis] | 366 | 1e-033 |
| ABL97960 photosystem II 10kDa polytpeptide [Brassica rapa] | 366 | 1e-033 |
| P49108 RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic; Flags: Precursor | 365 | 1e-033 |
| ABM54168 PSII 10Kd peptide [Brassica juncea] | 364 | 2e-033 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P49108 Photosystem II 10 kDa polypeptide, chloroplastic | 365 | 1e-034 |
| P27202 Photosystem II 10 kDa polypeptide, chloroplastic | 357 | 1e-033 |
| P06183 Photosystem II 10 kDa polypeptide, chloroplastic | 326 | 5e-030 |
| Q40163 Photosystem II 10 kDa polypeptide, chloroplastic | 325 | 6e-030 |
| Q40519 Photosystem II 10 kDa polypeptide, chloroplastic | 321 | 2e-029 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q1H8R2 Photosystem II 10 kDa polypeptide, chloroplast | 418 | 7e-040 |
| A1YN01 Photosystem II 10kDa polytpeptide | 366 | 7e-034 |
| Q84XP6 Photosystem II 10kDa polypeptide (Fragment) | 366 | 7e-034 |
| A1Z271 PSII 10Kd peptide | 364 | 1e-033 |
| Q0WWI7 PSII-R protein | 357 | 8e-033 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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