 |
Information for unigene UN42064
| FASTA Sequence |
| Unigene ID: UN42064 | Length: 643 |
SSR | | GGGATTTTGATTATCTCTCTCTCTCCTCTGTAGGAACAAGCCAAAAGCAAAGGATAAAAAAAGAGAGATGGAGTCTAGCAGAGGTC
AAGGTGGGATCCAGCAGTTGCTTGCTGCTGAACAAGAAGCTCAACACATCGTCAATGCTGCAAGGACCGCAAAGATGGGAAGGCTG
AAGCAAGCAAAGGAAGAGGCTGAGAAGGAGATAGCTGAATACAAAGCGAAAACTTGAGGAGACAAGTGGAGACTCGGGTGCGAATG
TGAAGAGGCTGGAGCAAGAGACTGATGAGAAGATCGAGCAGCTCAAAAGCGAAGCATCCAGGATTTCCAACGATGTTGTGGAGATG
CTCCTCAAACATGTCACCACTGTCAAGAACTGAGAGAGAGATTCCTGTAATAATAATAAAAAAAAATGTCATTTATGAGTGTTTAT
GCTCCTCCTATGTTTCTCCTTCTTTTTCATTCACGCGTGTGGTGTTACTGGATGGGGATCTCAGTGGACTCAATGTGTCGTTTTTG
TAATTTATTCTCTACCATCTTCTTCTGGTTGTTGTTGTGGTTGTATTCATCATTTCCCTTTTGAGGGAGGATTGTAATAAAAAAAC
AATTGAAATCTAAGATCTACATAATAAATACCATTATTATT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_186788 V-type proton ATPase subunit G1 [Arabidopsis thaliana] | 238 | 3e-018 |
| CAI48069 ATPase [Capsicum chinense] | 222 | 2e-016 |
| XP_002281146 PREDICTED: hypothetical protein [Vitis vinifera] | 222 | 2e-016 |
| O82702 RecName: Full=V-type proton ATPase subunit G 1; Short=V-ATPase subunit G 1; AltName: Full=Vacuolar proton pump subunit G 1 | 217 | 7e-016 |
| CAA06759 vag2 [Arabidopsis thaliana] | 214 | 2e-015 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O82628 V-type proton ATPase subunit G1 | 238 | 1e-019 |
| O82702 V-type proton ATPase subunit G 1 | 217 | 4e-017 |
| O82629 V-type proton ATPase subunit G2 | 214 | 8e-017 |
| Q9SP55 V-type proton ATPase subunit G | 213 | 1e-016 |
| O82703 V-type proton ATPase subunit G 2 | 190 | 5e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q5GMM8 ATPase | 222 | 1e-016 |
| Q0WT72 Vacuolar-type H+-ATPase (V-ATPase) subunit G2 | 214 | 1e-015 |
| Q2V994 ATPase-like | 214 | 1e-015 |
| B2WS67 Vacuolar ATP synthase subunit G2 | 212 | 2e-015 |
| B2WS83 Vacuolar ATP synthase subunit G2 | 212 | 2e-015 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G01390.1 VMA10 (VACUOLAR MEMBRANE ATPASE 10); hydrogen ion transporting ATP synthase, rotational mechanism | 239 | 1e-020 |
| AT3G01390.2 VMA10 (VACUOLAR MEMBRANE ATPASE 10); hydrogen ion transporting ATP synthase, rotational mechanism | 239 | 1e-020 |
| AT4G23710.1 VAG2; hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances | 215 | 6e-018 |
| AT4G25950.1 VATG3 (vacuolar ATP synthase G3); hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances | 182 | 4e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
