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Information for unigene UN42088
| FASTA Sequence |
| Unigene ID: UN42088 | Length: 546 |
SSR | | GGATATAAACTTGATCCTTGCTAACCATCCTCAGTGACTTAAAGAGAACGAGTGAAATTAAACATGAAGATAACTGTCTCCATATT
CTTTGTTGCCTCACTTCTTCTTATCACTTCATCCCTTGCTTCGCTAACGATCTCAGGTGGTGGTGGTGGTACTGGTGCGGTAGCTC
CAGCGCCGGAGATCAAAGATGGTGCAGAGTTAGAGGAATGGTGTGGAGGGAAGTGTGAAGTGAGATGCGAAGAAGCAGGTATGAAG
GATAGATGTTTGAAGTATTGTGGGATATGCTGCAAAGAGTGTAAGTGTGTTCCTTCAGGAACTTACGGGAATAAGCATGAGTGTGC
TTGCTATCGTGACAAGCTCAGCAGCAAAAAGACTCCCAAGTGTCCTTGATTATACATCTCAACCTCCATCCAAATTTTTAAATAAA
TAAAAAAAAGAAAGATCCGGTGAACTATATATGGATCTTTTGCTTATGAGTTTTTTCCTTCAATTGTCCTTTGTAATTCCCGATGT
TTTTTTTAATGACAAGTGATTCCCGGTGTC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_179096 gibberellin-regulated protein [Arabidopsis thaliana] | 464 | 1e-044 |
| XP_002883868 gibberellin-regulated family protein [Arabidopsis lyrata subsp. lyrata] | 454 | 2e-043 |
| XP_002285141 PREDICTED: hypothetical protein [Vitis vinifera] | 292 | 9e-025 |
| XP_002510126 GAST1 protein precursor, putative [Ricinus communis] | 290 | 2e-024 |
| XP_002313889 predicted protein [Populus trichocarpa] | 287 | 4e-024 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q948Z4 Snakin-1 | 281 | 1e-024 |
| P27057 Protein GAST1 | 177 | 1e-012 |
| P46690 Gibberellin-regulated protein 4 | 166 | 2e-011 |
| P47926 Protein RSI-1 | 162 | 6e-011 |
| P46689 Gibberellin-regulated protein 1 | 152 | 9e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| O82328 Putative gibberellin-regulated protein | 464 | 8e-045 |
| B9R733 GAST1 protein, putative | 290 | 1e-024 |
| B9HS89 Predicted protein | 287 | 3e-024 |
| C6T4L4 Putative uncharacterized protein | 287 | 3e-024 |
| B9MVY8 Predicted protein | 286 | 3e-024 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT2G14900.1 gibberellin-regulated family protein | 470 | 1e-047 |
| AT5G59845.1 gibberellin-regulated family protein | 259 | 3e-023 |
| AT2G39540.1 gibberellin-regulated family protein | 245 | 1e-021 |
| AT1G10588.1 Encodes a Gibberellin-regulated GASA/GAST/Snakin family protein | 219 | 2e-018 |
| AT1G10588.2 Encodes a Gibberellin-regulated GASA/GAST/Snakin family protein | 219 | 2e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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