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Information for unigene UN42113

FASTA Sequence
Unigene ID: UN42113Length: 1030 SSR 
GGATAGAAAGAGAGTTAGAAATATAGAGAAGAAATCATCACTTACAAAAATATTGTTCCCTCTTCAGCTCACATGGACACTTCGAG
GGACAAACAACTTCCTTCAGATACCTCTTGCATAGCTTCCTCATCTACAGCTTTTCCATGTCAAGATTCTCTAAACAAGAGCCAAG
AACAGAGTTTCAAAGATGAAGAACCAGGGGCTAACGATTCTAGTCAAGAACATAACAATCAAGAGCTCAATCTCATCGACTGCATA
GATAGCCAGAGTTATAACGGATCTACTACATCCACGGAACAAAAGCTTTTCTCATGCAACTACTGTCAAAGAACTTTCTATAGTTC
ACAAGCACTTGGTGGTCACCAAAACGCACACAAGAGAGAGAGGACTTTGGCAAAAAGAGGGCAACGTCTGGCAGCATCAGCCTCAG
CTTTTGGACATCCTTACGGTTTCTCTCCAGTTCCTTTCCATGGACAATGCAACAACAGGTCTTTGGGGATTCAAGCGCATTCGATG
ACCCACAAGCTAAGTTCGTATAACGTGTTTGGTGGTCACTATGGTCATGTCAACTGGTCAAGACAACCTCTTGATCAACAACCAGC
TATAGGTAAACTTCCTTCAATGGATAATTTTCATCATCATCATCATCAGCATCACATGATGATGATGATGGATTCTTCAGTAAATT
CACGGTCCAATGACATGGCTAGATCATCAAGCAACATAGGAAGGATTCTAGTAGGGTCGCCGCCTCTTGAACAATGGCAAGGAGGA
GTACTGTTAAGCACTAATCAGGAAGAGCAACAGAAGCTAGACTTATCACTTAAGCTCTAAGATTACTTCTTCTTGATTCTTGCATT
TAGTATCTTTTATTATGTTTTCATGTGATTGTTATCAATTTGTACTCTTATGTGTATACTTCTGTCTAATGTACATATTTTCACAT
ATCTACTTAGAGCAACATTATTGCTAGGAAAAATTTTAGAGTTCTTAGGTTTTTTTATTATTATTCTGAAGTTAAGAAACAATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197898 zinc finger protein 3 [Arabidopsis thaliana]8759e-092
XP_002872142 hypothetical protein ARALYDRAFT_910560 [Arabidopsis lyrata subsp. lyrata]8382e-087
XP_002871446 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]6526e-066
NP_196658 C2H2 and C2HC zinc finger-containing protein [Arabidopsis thaliana]6454e-065
XP_002527314 zinc finger protein, putative [Ricinus communis]3937e-036

Swiss-Prot top hits (Blast detail)Scoree value
Q39262 Zinc finger protein 38791e-093
Q42485 Zinc finger protein 13011e-026
Q39261 Zinc finger protein 21935e-014
Q39266 Zinc finger protein 71901e-013
Q39263 Zinc finger protein 41854e-013

TrEMBL top hits (Blast detail)Scoree value
Q0WT56 ZFP3 zinc finger protein8756e-092
Q9LEU3 Putative uncharacterized protein At5g109706453e-065
B9SMU5 Zinc finger protein, putative3935e-036
A5BQW1 Putative uncharacterized protein3792e-034
B9GMC4 Predicted protein (Fragment)3631e-032

Arabidopsis top hits (Blast detail)Scoree value
AT5G25160.1 ZFP3 (ZINC FINGER PROTEIN 3); nucleic acid binding / transcription factor/ zinc ion binding8763e-094
AT5G10970.1 zinc finger (C2H2 type) family protein6496e-068
AT1G80730.1 ZFP1 (ZINC-FINGER PROTEIN 1); nucleic acid binding / transcription factor/ zinc ion binding3011e-027
AT5G57520.1 ZFP2 (ZINC FINGER PROTEIN 2); nucleic acid binding / transcription factor/ zinc ion binding1934e-015
AT1G24625.1 ZFP7 (ZINC FINGER PROTEIN 7); nucleic acid binding / transcription factor/ zinc ion binding1909e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information