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Information for unigene UN42145

FASTA Sequence
Unigene ID: UN42145Length: 788 SSR 
GGACAACTCGCCGTCTCTCTCTCTCTCTCCCCCTCTCTCTCTCTCTTGATCATCAAACTTGCTCAGCTCCGGTCATAAGATGTCTG
AGGGATCAGTAAAGGTAGACTCTGCAGGAGAGTTATCAGATGTTGACAACGAGAACTGCAGTAGCGGCGGCGGAGGTGGGAGCAGC
AGTGGTGATACGAAGAGGATTTGCGTTGATTGCGGAACACTCCGAACTCCTCTCTGGCGCGGTGGCCCTGCTGGTCCTAAGTCGTT
GTGCAATGCTTGTGGGATCAAGAGCAGGAAGAAGAGGCAAGCAGCAGCTCTTGGAATCAAACCAGAAGAGAAGAAGAGAAAGAGAA
GAAGCAATAGCAGTAGTGATAGTGATCTAAGCTTCGATGAACATCGAGACGCTAAGAAGAAGATCATCAACAAAGGTGATGATGAT
GATCTCACCAGTAGAAGTAACAGCGAAGGAGTGAGCAAGTATTTGGATATAGGGTTCAAAGTTCCGGCGATGAAGCGATCGGCGGT
TGAGAAGAAGAGGCTATGGAAGAAACTCGGAGAGGAAGAAAGAGCCGCCGTGCTTCTCATGGCGCTCTCTTGTGGCTATGTTTATT
CATAAAACGAAGAAGAATTCGTTTCTTTTTGAGGGAATAATTAATTTAACTAGATAGAGGAGAGATATGTATGAATGTGTAATAGT
TAGTGATGTCGTGTTTTTTTTTTGTTCTGGTTCCCACTAATGTTATGTATTCATTTGTTAATGAATTTACATATTGAGAGCAATTC
AGTTTAATTAACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_188312 GATA transcription factor 17 [Arabidopsis thaliana]6345e-064
XP_002885174 hypothetical protein ARALYDRAFT_479155 [Arabidopsis lyrata subsp. lyrata]5342e-052
XP_002868160 hypothetical protein ARALYDRAFT_329901 [Arabidopsis lyrata subsp. lyrata]5208e-051
NP_680707 GATA type zinc finger transcription factor family protein [Arabidopsis thaliana]3173e-027
ADL36692 GATA domain class transcription factor [Malus x domestica]2521e-019

Swiss-Prot top hits (Blast detail)Scoree value
Q9LIB5 GATA transcription factor 176342e-065
Q9FJ10 GATA transcription factor 161996e-015
Q8LG10 GATA transcription factor 151971e-014
Q9SZI6 Putative GATA transcription factor 221801e-012
Q8LC79 GATA transcription factor 181763e-012

TrEMBL top hits (Blast detail)Scoree value
Q0WPA1 Putative uncharacterized protein At3g168706343e-064
Q8GW81 Putative uncharacterized protein At4g161413172e-027
B9N4N6 Predicted protein2519e-020
C6T5X2 Putative uncharacterized protein2302e-017
B9RZK8 GATA transcription factor, putative2052e-014

Arabidopsis top hits (Blast detail)Scoree value
AT3G16870.1 zinc finger (GATA type) family protein6352e-066
AT4G16141.1 sequence-specific DNA binding / transcription factor/ zinc ion binding3171e-029
AT5G49300.1 zinc finger (GATA type) family protein1996e-016
AT3G06740.1 zinc finger (GATA type) family protein1971e-015
AT4G26150.1 CGA1 (CYTOKININ-RESPONSIVE GATA FACTOR 1); transcription factor1809e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information