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Information for unigene UN42152
| FASTA Sequence |
| Unigene ID: UN42152 | Length: 469 |
SSR | | GGACAAAGTTCTGAATCTTCTGATTAGCTTAAACTGATCAAGAACTATTCACGAGATGGAAAAGACTTAAAATGCTTTAATAAGAG
CTATAAATAGATTTTCCTTCAAATTCAGTGCTCTGCTTCACCATTTTCTTCAATCTTTTTCTTCTTCTTCTTCTCCTCTTCCTCCT
TTGCCTCCTTCTCTGCTTTCTTTTCCTTTCTCCTCTTCTTCTCTTCCTCTTCTTCCTTCTTCTGCTTCACTTCTTCCTCAACTCTC
CTCTTTGCCTCCTCCTTTTCCTCTTTCAAAGCTTCAATCAAACGCCTCAAGCAAGTCTCTGCCTCTTCCCCTTCTGACTTAGGCAA
CAGATTCTCTCCAACATCGGCCGGCGTCATCTTGATTTCTTGAGTAAGAAAGAAGCTTTCTGAGATGAATTTAAGACGAGATTTTG
ATCGGAAGGGAACGATGATAATATTGGGGAAGAAGATCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_198817 AAA-ATPase 1 [Arabidopsis thaliana] | 279 | 1e-023 |
| NP_189499 AAA-type ATPase family protein [Arabidopsis thaliana] | 249 | 4e-020 |
| AAT38764 Putative ATPase protein, identical [Solanum demissum] | 228 | 1e-017 |
| NP_189492 AAA-type ATPase family protein [Arabidopsis thaliana] | 223 | 4e-017 |
| ABI34357 ATPase protein, putative [Solanum demissum] | 220 | 1e-016 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| A5E4P1 Protein PXR1 | 149 | 1e-009 |
| Q9EPQ2 X-linked retinitis pigmentosa GTPase regulator-interacting protein 1 | 148 | 2e-009 |
| P33322 H/ACA ribonucleoprotein complex subunit 4 | 144 | 5e-009 |
| P36044 Protein MNN4 | 143 | 7e-009 |
| Q6ZQQ6 WD repeat-containing protein 87 | 143 | 7e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9FLD5 Similarity to AAA-type ATPase | 279 | 9e-024 |
| Q9LJJ7 Mitochondrial protein-like | 249 | 3e-020 |
| Q6L3N9 Putative ATPase protein, identical | 228 | 8e-018 |
| Q9LH84 Putative uncharacterized protein At3g28510 | 223 | 3e-017 |
| Q0KIR7 ATPase protein, putative | 220 | 7e-017 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G40010.1 AATP1 (AAA-ATPase 1); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding | 279 | 1e-025 |
| AT3G28580.1 AAA-type ATPase family protein | 254 | 1e-022 |
| AT3G28510.1 AAA-type ATPase family protein | 223 | 4e-019 |
| AT3G28540.1 AAA-type ATPase family protein | 185 | 1e-014 |
| AT3G28540.2 AAA-type ATPase family protein | 185 | 1e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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