|
Information for unigene UN42156
FASTA Sequence |
Unigene ID: UN42156 | Length: 415 |
SSR | | CATGAAACATCATTTGTATTATCATAGGTTCTTTGAGAAGAAATATAAAAAACATTTATGAAACGAGTGACATTGTTCTAGTTTTC
AAAAGATTATTAAAGCAGTTTATTCAGAGGCTCGCTGTCTCTGAACAGTAGCCAAACAAAGCAACAAAGTACACAAGCAAACAATG
TGAAAATCTGGAAGTTACTCCTTCAACTGCGGATCAGTGGAGGTAGTAGCAGCAGCAGCAGCTGGGATTTTTGTTTTGGACTCTGA
AATAAGACCTTCAAGGGTTCTGTAGAAATCCTCAGGAAGTGGACCAGGTCGGTGCTGCGGAACGTGCCTTGGAATCGGTGCATCGT
TCTCAATTACTTCACACTCGTAGTCATCTGGAACACCCCAAGGGTCCCATTCGATCATCTTCCCGATGAGC
|
|
|
GenBank top hits (Blast detail) | Score | e value |
XP_002864198 hypothetical protein ARALYDRAFT_495348 [Arabidopsis lyrata subsp. lyrata] | 332 | 1e-029 |
NP_568778 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 5 [Arabidopsis thaliana] | 331 | 1e-029 |
XP_002327504 predicted protein [Populus trichocarpa] | 270 | 2e-022 |
XP_002305272 predicted protein [Populus trichocarpa] | 265 | 6e-022 |
XP_002513634 NADH dehydrogenase, putative [Ricinus communis] | 263 | 1e-021 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9FLX7 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial | 331 | 5e-031 |
TrEMBL top hits (Blast detail) | Score | e value |
B9MX65 Predicted protein | 270 | 1e-022 |
A9P8K8 Predicted protein | 265 | 4e-022 |
B9RIR5 NADH dehydrogenase, putative | 263 | 7e-022 |
B6TZR1 NADH-ubiquinone oxidoreductase 13 kDa-B subunit | 244 | 1e-019 |
C6T2Y2 Putative uncharacterized protein | 243 | 2e-019 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G52840.1 NADH-ubiquinone oxidoreductase-related | 336 | 2e-032 |
AT4G28005.1 LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: NADH-ubiquinone oxidoreductase-related (TAIR:AT5G52840.1); Has 20 Blast hits to 20 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 171 | 3e-013 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|