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Information for unigene UN42205

FASTA Sequence
Unigene ID: UN42205Length: 744 SSR 
AAATAGTTTGATGAAGAAGTGTTTCCAAGGACAATCATGACAACATAAACTAGATCCTGATTTGACTTGACAACAGATAAAAGAGA
AAACAAAACATCTGGTGAAGAAGATAATCAAAGCATACAGAATGTCCGAACTAAAAAGATTGTTTGCTCTTCTCAATTTCACAATC
TCTAACAAGTAACAACCAACATATCACTTATAGCAAAGCTCTAAGAGAAAAAAAACAGCTTCGACTTAAGGTGTATGTATGAATTG
GACTCTCATGTTAGAGCTCGGACATAAGTCTGTCTGGACAAATCTAAAATTAGAAACTAACTCATAAATTATATCCTAAAAAAGAG
ACTTTGTATCAACAGAATCTCCATAGATTCTTCAGAACAGGAGCTAAGAGAGAGAGGGGATCTTACACACGAGTGACGCGGCTGTC
TTGGTTACAGGTGACATGGAACCAGGTACAAGGGTTAACAAGAGTTGGATCCCAGCTCTGGAGCACATGGTCTGGATCCGATAAGC
TCCTGCGAAGAGCGTAAAGGGCATCTCCTTCCGAGTTCGCATCCACCGGGTGGTGAATCAGAGCTAAAGTCAGGGCTAGAGAAGCC
GCGAGGAGCTCCCACCGACAGTTTCGGAACGCCATCGTGAGCTAATCGAAAAAAAGGGAATTGAAGTAAAGTTAGTTTCTCTCTTT
TTACGATCAGAGATATTAGGGTTTCGCTCTCTCTCTCTCTTTCTCTTTGTTGAAGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197608 leucine-rich repeat-containing protein [Arabidopsis thaliana]3414e-030
XP_002875621 leucine-rich repeat family protein [Arabidopsis lyrata subsp. lyrata]2903e-024
NP_189960 leucine-rich repeat-containing protein [Arabidopsis thaliana]2851e-023
NP_974381 leucine-rich repeat-containing protein [Arabidopsis thaliana]2851e-023
CAB83146 leucine-rich repeat protein LRP-like [Arabidopsis thaliana]2851e-023

Swiss-Prot top hits (Blast detail)Scoree value
Q94F62 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 12085e-016
Q9XIC7 Somatic embryogenesis receptor kinase 22041e-015
Q94AG2 Somatic embryogenesis receptor kinase 12032e-015
Q9SKG5 Somatic embryogenesis receptor kinase 41782e-012
Q8LPS5 Somatic embryogenesis receptor kinase 51531e-009

TrEMBL top hits (Blast detail)Scoree value
Q9FPJ5 AT5G21090 protein3413e-030
Q6NQP4 At3g437402859e-024
Q9LZH3 Leucine-rich repeat protein LRP-like2859e-024
C6TIK1 Putative uncharacterized protein2661e-021
C6ZRZ5 Leucine-rich repeat protein2661e-021

Arabidopsis top hits (Blast detail)Scoree value
AT5G21090.1 leucine-rich repeat protein, putative3465e-033
AT3G43740.1 leucine-rich repeat family protein2883e-026
AT3G43740.2 leucine-rich repeat family protein2883e-026
AT4G33430.1 BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE); kinase/ protein binding / protein heterodimerization/ protein serine/threonine kinase2085e-017
AT1G34210.1 SERK2 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2); kinase2041e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information