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Information for unigene UN42216

FASTA Sequence
Unigene ID: UN42216Length: 1177 SSR 
GGAATCTCCGACATCTCAAGCTCTCTCTTCTCCATACCCAGAACACCACAAGCTCTCTCTTCCATTCACATATCACCACCACGAGT
TCTCTTCCCCCATACATGAAGACTTCTCTCTCTCTCTCCCCCGATAGACACAGACCTCGAGCTCTCTCTCGTTCTCTCGATCTCTT
GAAGCTCATCTCATCTCACTCTCTGATGTCACGTGCAATAACGCTACCGGTGCAGTCCCTAAGTTACATCTCCCAAACGGCTGCTT
AACTGGAACGATCAAAGCCAACAGTATCCTCTTCGAGCTGCGTCATCTTCGTCACCTCAATCTCTCTCCATCTCCAACGCATCTCG
AGCTCTTTATCTCTCTCAAGCTCTCCATCTCGGTTCGTCTCAAGCTTCTCTCACTCAAACTTCTCTCACTCAAGCTTCTCTCACTC
AAGCTCACTCTGTTTCTGATTTGCAGAGCTTTGACATACATTCATGGAGGAGTAGGAGTCTGCCACAGAGACATAAAACCACAGAA
TCTTCTGGTTAATCCTCATACACATCAGGTCAAGCTCTGCGACTTTGGTAGCGCTAAAGTTCTGGTGAAAGGCGAACCAAACATCT
CATACATCTGTTCCTTGGACAGGCTCTCTCAGCTTCTCCATAGCATCTCAGTTTCTCAGGCTTCTCCTAAGCTTTGTCTGTCTTTC
ACTCTCTCGTATCAAGCTCTCCCAAGCTTCTCTCACTCAAGGTCTCCCAAGCTCTCCCAAGCTTCTCTCACTCAAGCTCTCCTTGC
GTGTCTGCATCCAAAATATGGTCTGGTCAAGTGGATTAAGTTGGCGACAGCGACGATGGCGTTACACAATTTCATACGTGATTCAC
ATCGGGATGATCAAGATTTTTTAGAATGGGAAAATGTTGATGTTGGAGTTGAAGAAGCTCATAGTGATGGTGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGGTGATGATGGTGGTGGACATATTGAATATGAACC
GAGAGGTGATACAGCAATGGAGGCTTTGCGTGATAACATCACAAACGGATTTGGTAGAGGTCATTTACCATATTAAATCATGTTTA
AGTTAATAATTTGATTTTTTTTTAAGACTTGTTGTAATATTTATTTTATCAACCAACTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002991115 hypothetical protein SELMODRAFT_451471 [Selaginella moellendorffii]3175e-027
NP_196968 Shaggy-related protein kinase epsilon [Arabidopsis thaliana]3141e-026
CAB87631 protein kinase MSK-3-like [Arabidopsis thaliana]3141e-026
ABK24355 unknown [Picea sitchensis]3141e-026
XP_002873682 kinase family protein [Arabidopsis lyrata subsp. lyrata]3141e-026

Swiss-Prot top hits (Blast detail)Scoree value
Q8VZD5 Shaggy-related protein kinase epsilon3145e-028
P51139 Glycogen synthase kinase-3 homolog MsK-32958e-026
Q39019 Shaggy-related protein kinase kappa2903e-025
Q40518 Shaggy-related protein kinase NtK-12894e-025
P43288 Shaggy-related protein kinase alpha2885e-025

TrEMBL top hits (Blast detail)Scoree value
A9NUP4 Putative uncharacterized protein3148e-027
B6T841 Glycogen synthase kinase-3 MsK-33075e-026
C5XFS4 Putative uncharacterized protein Sb03g0095803075e-026
A0JCI4 Shaggy-like kinase3067e-026
A9SAB9 Predicted protein3059e-026

Arabidopsis top hits (Blast detail)Scoree value
AT5G14640.1 SK13 (SHAGGY-LIKE KINASE 13); ATP binding / protein kinase/ protein serine/threonine kinase3145e-029
AT1G09840.1 ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41); ATP binding / protein kinase/ protein serine/threonine kinase2903e-026
AT1G09840.2 ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41); ATP binding / protein kinase/ protein serine/threonine kinase2903e-026
AT1G09840.3 ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41); ATP binding / protein kinase/ protein serine/threonine kinase2903e-026
AT1G09840.4 ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41); ATP binding / protein kinase/ protein serine/threonine kinase2903e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information