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Information for unigene UN42234
| FASTA Sequence |
| Unigene ID: UN42234 | Length: 677 |
SSR | | CGATTGAACGCAAAATTAGGGTTTCATTTTCCCCCTTTTCGACTTGCTTCTTCCCCTTTCAGAGCCGCTTCACTATGATTCTCCCC
TCTTCTTCTTCTTCTCCTCAAGCTTTTGATTCTTCTTCTTGAATTTTGCAGATTTTTTTTTCCTCATTAATTTATAATAAATCTGC
AAAAAAATATCTCTTCGATCCAAATGGGAAAATTCTGCTGCTTCACTTCCCCTTCCGAGGTTGTGGGAGGACAAGCATTTGGAAGG
TGATGACAAATGAGGAGGCGATGGAGATAGCTAAAAGGGTGAAAGATCCACAGAAGGCAGCTAAGGAGTTAACAGCTGAAGCATTG
AGAAGAGAGAGTAAAGACGACATATCTTGTGTCGTGGTCCGTTTCAGATGACAAAACTCTTTGATTCATCAAGAGAACACAAAAAA
GCTCTGACTCTGATAATTTTGGTTCCGGTTTGGACCGGTCTAAAGTTTTGGTTTCTGACAGCTTTCTTGCTATATAGCGCTTTATG
TGCGTTCGTTGTTATGTAAATTGTGTATGTGTTTAAAGGAGGAGTTTGGTTGGGTGATGATATGGTGGGGTTGTGTTTATTATTAT
TGGTTGATTTGTTATATTTAATCATCGTGACATAAAATATTAGGGCCTATTTTGAATAATATTTATATATGTGGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564165 putative protein phosphatase 2C 9 [Arabidopsis thaliana] | 236 | 5e-018 |
| AAM61437 protein phosphatase type 2C, putative [Arabidopsis thaliana] | 236 | 5e-018 |
| XP_002890508 hypothetical protein ARALYDRAFT_472467 [Arabidopsis lyrata subsp. lyrata] | 236 | 5e-018 |
| NP_001185062 putative protein phosphatase 2C 9 [Arabidopsis thaliana] | 236 | 5e-018 |
| XP_002273183 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] | 219 | 5e-016 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LME4 Probable protein phosphatase 2C 9 | 236 | 2e-019 |
| Q9S9Z7 Probable protein phosphatase 2C 10 | 199 | 5e-015 |
| Q7XQU7 Probable protein phosphatase 2C 41 | 197 | 8e-015 |
| Q0JAA0 Probable protein phosphatase 2C 44 | 181 | 6e-013 |
| Q8L7I4 Probable protein phosphatase 2C 17 | 179 | 1e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GUW5 Predicted protein | 209 | 5e-015 |
| B9H730 Predicted protein | 207 | 8e-015 |
| A2Q6E4 Protein phosphatase 2C-like | 203 | 2e-014 |
| B9RJK7 Protein phosphatase 2c, putative | 202 | 3e-014 |
| B7F9X1 cDNA, clone: J100008G07, full insert sequence | 197 | 1e-013 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G22280.1 protein phosphatase 2C, putative / PP2C, putative | 237 | 2e-020 |
| AT1G34750.1 protein phosphatase 2C, putative / PP2C, putative | 200 | 3e-016 |
| AT1G78200.1 protein phosphatase 2C, putative / PP2C, putative | 180 | 7e-014 |
| AT1G78200.2 protein phosphatase 2C, putative / PP2C, putative | 180 | 7e-014 |
| AT2G20630.1 protein phosphatase 2C, putative / PP2C, putative | 168 | 2e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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