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Information for unigene UN42243

FASTA Sequence
Unigene ID: UN42243Length: 988 SSR 
GGAACCTCATTTGTCATAAACTCACTTCCTCTCTCTCTCTCTCTCTCTCTGCCCCCATGGAAGAAACCAATGGACAAAGAGAAACT
CACAACTTCATGAACGTCAATGTTGAATCCTTTTCTCAGCTTCCGTTCATCCACCGTACCCGTACTCCTCCCAAAGATAAAACCTC
CATGATTCGTCTCTTCGGCCAAGAGCTCGTTAGAGATAACCCTCGACAAGAAGCCTTCTCTCCAGATCCTTGTGAAACTACAACAA
CCAAGATCAACCATGAGAAGAATGTCAAGGAAGATAATAAGGACAAGGACAACATCAGTAACAGGAGATTTGAGTGTCACTACTGT
TTCAGAAAATTCCCGACTTCTCAAGCCCTAGGTGGACACCAAAACGCTCACAAACGCGAACGCCAACACGCCAAACGCGGTTCCAT
GACCCCATACCTTGATCACCATCATTATTATCAGCCTGAGCCTCACCACGTCTACGGCTTCCTCAACAACTATCACCACCGTCACT
ATCCCTCGTGGACGACGGAAGCTAGATTCTACGGTGGTGGTGGTGGTGGACTACAACAAATGCCATCATATTACTCAGGCACTCTT
CTTCCTCCTTCTTCTTCTTCTTCTACCCCACCGACGATCAACGGAAGTCCTTTAGGTTTCTGGCGTGTACCGCCTTCCACGTCAAC
AAACGCTATTCATGGAGTTTACTCAGCTTCACCAGCTTTAGCGTTTAGGGCCCATGACCAAGAGAGTAGGGAACCGAGTTGGCCCT
ACAAATTGATGAAACCTAATGTGAAAGATCATTTGAGTCTCGATCTTCATCTTTGGTACTTCTTTGCGTTGGTATATCATTTAAAC
CTGGCCAACCAATTCTTCTTAGAGTGTTCATTCTTTCTGAAGAGAACCGGGCAGGATGTGTAGATCTTGAACGTTTGGCTTTTTCT
TATTTATTATGAGTTTATATGATTATAAAATATGTTTATCCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_181725 zinc finger protein 8 [Arabidopsis thaliana]9521e-100
XP_002879961 hypothetical protein ARALYDRAFT_903538 [Arabidopsis lyrata subsp. lyrata]9393e-099
AAA87304 zinc finger protein [Arabidopsis thaliana]6794e-069
XP_002878184 hypothetical protein ARALYDRAFT_486259 [Arabidopsis lyrata subsp. lyrata]4001e-036
ADL36626 C2H2L domain class transcription factor [Malus x domestica]3703e-033

Swiss-Prot top hits (Blast detail)Scoree value
Q39265 Zinc finger protein 61577e-010
Q42485 Zinc finger protein 11523e-009
Q39263 Zinc finger protein 41523e-009
Q39262 Zinc finger protein 31504e-009
Q39266 Zinc finger protein 71487e-009

TrEMBL top hits (Blast detail)Scoree value
P93751 At2g41940/T6D20.169527e-101
Q39267 Zinc finger protein (Fragment)6793e-069
B6SZ06 Zinc finger protein3603e-032
B9SYV7 Nucleic acid binding protein, putative3325e-029
B9IIB9 Predicted protein3272e-028

Arabidopsis top hits (Blast detail)Scoree value
AT2G41940.1 ZFP8 (ZINC FINGER PROTEIN 8); nucleic acid binding / transcription factor/ zinc ion binding9524e-103
AT3G58070.1 GIS (GLABROUS INFLORESCENCE STEMS); nucleic acid binding / transcription factor/ zinc ion binding3029e-028
AT5G06650.1 GIS2 (GLABROUS INFLORESCENCE STEMS 2); nucleic acid binding / transcription factor/ zinc ion binding1971e-015
AT1G67030.1 ZFP6 (ZINC FINGER PROTEIN 6); nucleic acid binding / transcription factor/ zinc ion binding1576e-011
AT5G05120.1 zinc finger (C2H2 type) family protein1532e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

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