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Information for unigene UN42244

FASTA Sequence
Unigene ID: UN42244Length: 677 SSR 
GGGAACGCCGTTCAAACATCGATTTTGTCTCTCCGGACCTGGAGATCTCTCTCTCTCTTCTTCCTCCTCCTCCTCCCAAATCCTTT
CTCCTCGTCGCACGCGCACGCCCACGCGCTTCATCTTCATCAGCCTCGATTCAAGTTTTGAGGAGCATTGTGGTGCTAGGATGGGT
GTGAAGCAGGCTCTAAGGAGCATCGATGCGTTCCCAAGAGCTGAGGATCATCTTCTTCAGAAAACTCAATCTGGTGCCGTTGTATC
CATTGTTGGGCTCTTTATAATGGCTACGTTGTTCTTGAGCGAGCTGAGTTTCTATCTTAACACACTTACCGTGCACCAGATGTCAG
TGGACTTAAAGCGTGGAGAAACTCTTCCAATTCATGTAAACATGACGTTCCCATCTTTGCCTTGTGATGTATTGAGCATGGATGCT
ATCGACATGTCAGGGAAGCATGAAGTGGATCTTGATACAAACATTTGGAAGCTCCGTCTCAACAGTCATGGTCATATCATTGGCAC
AGAATATATATCTGATCTTGTTGAAAAGGAGCATGATCACTCTTCTCACAAGCACGATGAACACAAGAATGAGACGGAAGCATTAA
ATATACTTGGGTTTGACGAAGCTGCTGAGACGTTGATTAAAAAGGTGAAGCAAGCATTGGCGGATGGAGAAGGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_188868 Endoplasmic reticulum vesicle transporter protein [Arabidopsis thaliana]7671e-079
BAB17274 unnamed protein product [Arabidopsis thaliana]7671e-079
XP_002883352 hypothetical protein ARALYDRAFT_479742 [Arabidopsis lyrata subsp. lyrata]7671e-079
XP_002322569 predicted protein [Populus trichocarpa]6927e-071
ACU19028 unknown [Glycine max]6821e-069

Swiss-Prot top hits (Blast detail)Scoree value
Q5EAE0 Endoplasmic reticulum-Golgi intermediate compartment protein 32344e-019
Q4R8X1 Endoplasmic reticulum-Golgi intermediate compartment protein 32282e-018
Q9Y282 Endoplasmic reticulum-Golgi intermediate compartment protein 32273e-018
Q9CQE7 Endoplasmic reticulum-Golgi intermediate compartment protein 32273e-018
Q5R8G3 Endoplasmic reticulum-Golgi intermediate compartment protein 32273e-018

TrEMBL top hits (Blast detail)Scoree value
Q94K91 Putative uncharacterized protein At3g222807679e-080
Q9FH30 Gb|AAF34232.17679e-080
B9IHF3 Predicted protein6925e-071
C6TB26 Putative uncharacterized protein6827e-070
B9HDF7 Predicted protein6612e-067

Arabidopsis top hits (Blast detail)Scoree value
AT3G22290.1 unknown protein7982e-085
AT1G36050.1 unknown protein2514e-022
AT1G36050.2 unknown protein2514e-022
AT4G27080.1 thioredoxin family protein1466e-010
AT4G27080.2 thioredoxin family protein1332e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
111  50%

Unigene MembersMember information