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Information for unigene UN42246

FASTA Sequence
Unigene ID: UN42246Length: 773 SSR 
GGATCCTCGGCCTCCTCGTTTTGCACACTCTCCTTTCCATTTCTCTTGTTTTCTTCTTATTCTTTGTAGCCTCCCTCCCTCCCTCT
CTCTCTCTTTCTCCTTCTCCTGTGTCTTACACAATTAATGGCGTCTTTAAATTTGAAGATGAAGAAAAGGGAGAATTATGGCACCG
AACCTGACAAGAAAAAACTGGCTATGACCGGAATCCGACACCAGTTACTGCTACTCCTTCGCCGCCGTCACCGTTTATTTCCTCTG
GTCTCTGCCTTCTCCGGCTGTCTCCTCCTCCTCCTCCTCTTCTCCTTTTCCTTCCCTCCTGTGATCCATCGCTCACCACCAGGTAG
GAAGAATCAAATTGCCGTGGAACCCAAGCTTCTTGTACCCGAAAATGGAGGAAGATCGGATCGGCACTTATGGAGCTCGAAATTGT
CCAACTCCTACTATGGCTGCAGCAATGCCAGTGACACCTTTCAAGTTTTGGATAAGACGAGTCAAACAGATCGATATCTACTGATC
GCTACGAGCGGAGGGTTAAACCAACAGCGAACAGGGATAATAGACGCTGTGGTTGCGGCTTACATCCTAAATGCCACTCTTGTGAT
CCCTAAACTGGACCAAAATTCATACTGGAAGGACACCAGCAACTTCGAAGAAATATTTGACGTTGATTGGTTCATTACGCATCTCT
CCAAAGATGTCAAGATCATCAAGGAGCTTCCTAAAGGAGAGAGTCAAGACTCACTGGCTACAGTCCATTCGTGTTCCCAGGAGTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_195552 protein root hair specific 17 [Arabidopsis thaliana]7771e-080
XP_002866794 hypothetical protein ARALYDRAFT_490601 [Arabidopsis lyrata subsp. lyrata]7662e-079
XP_002510658 conserved hypothetical protein [Ricinus communis]4482e-042
XP_002889072 hypothetical protein ARALYDRAFT_476779 [Arabidopsis lyrata subsp. lyrata]4429e-042
AAF16673 putative auxin-independent growth promoter; 88924-91907 [Arabidopsis thaliana]4373e-041

Swiss-Prot top hits (Blast detail)Scoree value
Q8W486 DUF246 domain-containing protein At1g049102221e-017

TrEMBL top hits (Blast detail)Scoree value
Q9SVE6 Putative growth regulator protein7779e-081
B9R8L5 Putative uncharacterized protein4481e-042
Q949U4 Putative auxin-independent growth promoter protein4372e-041
Q9SFW3 Putative auxin-independent growth promoter; 88924-919074372e-041
B9H1Q7 Predicted protein4292e-040

Arabidopsis top hits (Blast detail)Scoree value
AT4G38390.1 unknown protein7775e-083
AT1G76270.1 unknown protein4371e-043
AT1G20550.1 unknown protein4066e-040
AT4G16650.1 unknown protein3232e-030
AT1G22460.1 unknown protein2542e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information