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Information for unigene UN42251
FASTA Sequence |
Unigene ID: UN42251 | Length: 458 |
SSR | | ATCGAAACATCATGTAATAACATGCTCAACTCAATGATTACATGAGGATGCAAACCATCTTTTGTATTGTTTCTCCATAAAACTGA
AGAAATAAGCACTCAGAATAATGAGAGAACCATTGAGTTGAAACATCAAAGAAGACTACTACAGTTCTCAACATTACCAAAACTGT
GTAATAAAAAGCCATAAGATAACATTATTGCCTTAACCCAACAAACTCAAAACACCCTTCATCAAAACTCCTCAGATTCAAAATTC
AATAAGCCAACACACACACACACCAAACTTAGACCTTGAGGAAAACAAACTCCTCCACCGCTGGGATCTCCCCAATCTTCTTAAGC
GTCTCCTTGCTCGGCTGATCATCAACACCAATCGCCATGATCGCTTGCTTCCTCGGTGCTATCCTTCCAACGCTCATGAAGTTCAC
ATTCACGTTAGACTCTCCAAGTATGCTC
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GenBank top hits (Blast detail) | Score | e value |
AAM60833 Phosphoglycerate dehydrogenase-like protein [Arabidopsis thaliana] | 263 | 1e-021 |
NP_195146 D-3-phosphoglycerate dehydrogenase [Arabidopsis thaliana] | 263 | 1e-021 |
BAD94241 Phosphoglycerate dehydrogenase - like protein [Arabidopsis thaliana] | 263 | 1e-021 |
XP_002867129 hypothetical protein ARALYDRAFT_491252 [Arabidopsis lyrata subsp. lyrata] | 259 | 3e-021 |
XP_002883891 predicted protein [Arabidopsis lyrata subsp. lyrata] | 256 | 7e-021 |
Swiss-Prot top hits (Blast detail) | Score | e value |
O04130 D-3-phosphoglycerate dehydrogenase, chloroplastic | 201 | 1e-015 |
TrEMBL top hits (Blast detail) | Score | e value |
O49485 Phosphoglycerate dehydrogenase-like protein | 263 | 7e-022 |
Q56WY7 Phosphoglycerate dehydrogenase-like protein | 263 | 7e-022 |
Q8LGJ6 Phosphoglycerate dehydrogenase-like protein | 263 | 7e-022 |
C0L2V3 Putative phosphoglycerate dehydrogenase (Fragment) | 253 | 1e-020 |
B9RYA3 D-3-phosphoglycerate dehydrogenase, putative | 249 | 3e-020 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT4G34200.1 EDA9 (embryo sac development arrest 9); ATP binding | 264 | 6e-024 |
AT3G19480.1 D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putative | 244 | 1e-021 |
AT1G17745.1 PGDH (3-PHOSPHOGLYCERATE DEHYDROGENASE); phosphoglycerate dehydrogenase | 202 | 1e-016 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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