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Information for unigene UN42255

FASTA Sequence
Unigene ID: UN42255Length: 665 SSR 
GAGATAAAAATGATGGAAGTGGATGGATCCAACACTTCGATGAATCGTGCTCCTCCTCCTCCTCCTCCTCAATCATCCTTCTTACG
TTCCAGCCGATCCAAAGTATTGTATCAGTTTAAGCAGCAGAAACTACCGGCTTGTAAGCCAGTCTTAACTCCAACCTCGGTTATAA
CAGTGTTTATGTTGATGGGTTTTGTTTTCATTCCCATTGGCTTTGTTACTCTCCATGCTTCTCGTCATGCTATTGAAATTGTTGAC
CGGTATGATGTTGAGTGTATTCCTGAAGAATATAGACCCAACAAACTTTCTTACATTACAGACTCATCCATCTTTAAGTGACCAAG
AGGACTTTATTGTGTGGATGCGAGCAGCTGCTTTACTAAGCTTCAGGAAACTATACGGAAGAATCGAAGAGGACTTGGAACCAGGG
AGCGTTGTTGTGGTGAATTTGTTCAACAACTACAACACTTATAGCTTTAGTGGGCAGAAGAAGCTTATTCTCTCCACGTCGAGTTG
GTTAGGAGGAAGAAACGACTTCCTCGGCATCACATATATCGTCGTTGGTGCCTCTTCCATAGTCATATCCATCATCTTCATATTGC
TCCATTTAAAAAATCCGAGGCCTTATGGAGACAATTCTTGGAACAAGAAAAGCCTTTCGAGCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002863424 LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata subsp. lyrata]5422e-053
NP_568657 putative ALA-interacting subunit 2 [Arabidopsis thaliana]5412e-053
BAF00516 hypothetical protein [Arabidopsis thaliana]5412e-053
AAM63135 unknown [Arabidopsis thaliana]5403e-053
BAD44111 unknown protein [Arabidopsis thaliana]5341e-052

Swiss-Prot top hits (Blast detail)Scoree value
Q67YS6 Putative ALA-interacting subunit 25411e-054
Q9LTW0 ALA-interacting subunit 13643e-034
Q8L8W0 ALA-interacting subunit 53626e-034
Q9SLK2 ALA-interacting subunit 33582e-033
Q9SA35 Putative ALA-interacting subunit 43492e-032

TrEMBL top hits (Blast detail)Scoree value
B9T807 Putative uncharacterized protein4416e-042
B9HZN6 Predicted protein4084e-038
A2X1G2 Putative uncharacterized protein3654e-033
B8AKX4 Putative uncharacterized protein3645e-033
A3A3M9 Putative uncharacterized protein3628e-033

Arabidopsis top hits (Blast detail)Scoree value
AT5G46150.2 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein5411e-055
AT5G46150.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein5411e-055
AT3G12740.1 ALIS1 (ALA-INTERACTING SUBUNIT 1); phospholipid transporter3643e-035
AT1G79450.1 ALIS5 (ALA-Interacting Subunit 5)3626e-035
AT1G79450.2 ALIS5 (ALA-Interacting Subunit 5)3626e-035

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information