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Information for unigene UN42282

FASTA Sequence
Unigene ID: UN42282Length: 510 SSR 
CGTAATGAAACTTTGAATGTCAATAAACTTAATCAAAATTAAAACATGAGTTAATAACTGAACACTAGCAGTAGTTTCAAGCCTCT
CTCTCTCTGATCACTCACTTGACAAAGTAGAGCTTGCCCATGACATGAAGGACAGCGACAAAGGCAATGAAACCGATGCTCATGAC
AAGGACGACATTAGGGGAGATCTTGAGACCGGGTGCGTCATCCGTGTAGAACTGAAGCATGGATCCTGCTGCACCACCAGAGGCTC
CTCCTCCTCCACTTCCACTAGGCTTCCTCCTACGCATGCTAGCAGCTGCGGCTGCACTTCCTCTCTGTGGAGCTCCACTTCCCACC
ATCCCTTCTTTAATTAACAGATTTGGCTTTAGAGATTCTGATGTCGACGAGAACGATAACGAGACGAAGAGATGTTCGGGACCTTT
TGTGTTGGAGTTGACCGGCCTCTTGATTTTTTTATAACACGGGTTCTTCTAGCCACGCACTTTGTATCATATCAGCCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_182033 protein transport protein sec61 subunit beta [Arabidopsis thaliana]3842e-035
XP_002881995 SEC61 beta [Arabidopsis lyrata subsp. lyrata]3842e-035
NP_191613 Preprotein translocase Sec, Sec61-beta subunit protein [Arabidopsis thaliana]3358e-030
BAC42429 putative transport protein subunit [Arabidopsis thaliana]3322e-029
XP_002878341 SEC61 beta [Arabidopsis lyrata subsp. lyrata]3322e-029

Swiss-Prot top hits (Blast detail)Scoree value
P38389 Protein transport protein Sec61 subunit beta3849e-037
P60467 Protein transport protein Sec61 subunit beta1473e-009
P60468 Protein transport protein Sec61 subunit beta1473e-009
Q9CQS8 Protein transport protein Sec61 subunit beta1473e-009
Q5RB31 Protein transport protein Sec61 subunit beta1473e-009

TrEMBL top hits (Blast detail)Scoree value
B9DGF7 AT2G45070 protein3841e-035
Q9M206 Transport protein subunit-like3356e-030
Q8GY93 Putative transport protein subunit3321e-029
C6T1E8 Putative uncharacterized protein3169e-028
A9PF90 Predicted protein3104e-027

Arabidopsis top hits (Blast detail)Scoree value
AT2G45070.1 SEC61 BETA; protein transporter3857e-038
AT2G45070.2 SEC61 BETA; protein transporter3857e-038
AT2G45070.3 SEC61 BETA; protein transporter3857e-038
AT2G45070.4 SEC61 BETA; protein transporter3857e-038
AT3G60540.1 sec61beta family protein3444e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information