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Information for unigene UN42294

FASTA Sequence
Unigene ID: UN42294Length: 906 SSR 
GGGAAGAAGGAGATCACCTTAAGAGTACTCGTGTTGATGATAAAGAAATGGAGTTTGGTTCCTCCGAAAGCGAAACAGAGTCATCG
AGGAATATTAACCCAACTCGGAGACGATCCAAGCGAACTAGGAAACTCGGATCGTTCGATTTCGACTTCAAGAAGCTCAAAACGGT
CCAAGCCGGTGAGACAGAACATCACCATAGCTCAGCTTCCGACACAACCACGGAGGAAGATCTCGCCTTTTGTCTCATTATGCTCT
CGAGAGACAAGTGGAAGAAGAAGCAAACTGTAGTAGAAGAAGAAGAAGAAGACGATGACGTGTCAGATCATCATGAATGCAAGAAC
AGAGGAGGAAGAGGGAGATTCAAGTGCGAGACTTGTGGTAAAGTGTTCAAATCTTATCAAGCACTAGGAGGACACAGAGCAAGCCA
CAAAAAGAACAAGACTTTCACCAAAACAGAGCATGAGAAAACAGAGTACTCTGTTAATGGAGGAGGAGTCAGTGAGAAGAAAATTC
ACCAATGTCCGATCTGTTTTAGGGTTTTCAGTTCAGGACAATCGCTCGGAGGTCATAAGAGGTCACACGGGATCAACAACATCGTG
TCAGGAAGAGTCTTGTCTGTGAATGACGTTGTCCGAATCCCTAAAGAAGTGAAAGATCATAGGATGATAGATCTTAATCTTCCTGC
ACCAAACGAAGACGATCATGAACATGAACCCTCTGTGGTGTTTGATGAATGGTGAAAAACAAAAAGGTAACAAACAGACTTTGCGT
GATCTTATCGGTTTATTATTATTCTTTTTTTTTTGGTTTGATCGAACTTTAAAAACAAGTTTATGTTTTTATTTGTTTTTGGTTAT
TATTATGATTTATAATTTTAAATGCAATGGTGGCTACTTTTACATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880157 hypothetical protein ARALYDRAFT_483645 [Arabidopsis lyrata subsp. lyrata]7726e-080
NP_182037 C2H2-like zinc finger protein [Arabidopsis thaliana]7564e-078
XP_002876568 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]6104e-061
BAC43008 putative zinc finger protein [Arabidopsis thaliana]5943e-059
NP_191617 C2H2-like zinc finger protein [Arabidopsis thaliana]5943e-059

Swiss-Prot top hits (Blast detail)Scoree value
A1YFX5 Zinc finger and SCAN domain-containing protein 41235e-006

TrEMBL top hits (Blast detail)Scoree value
Q9SHD0 At2g45120/T14P1.77563e-078
Q8GX74 At3g605805942e-059
Q9M202 Zinc finger protein-like5942e-059
O22090 C2H2 zinc-finger protein ZPT3-34373e-041
B9IBW4 Predicted protein (Fragment)4302e-040

Arabidopsis top hits (Blast detail)Scoree value
AT2G45120.1 zinc finger (C2H2 type) family protein7661e-081
AT3G60580.1 zinc finger (C2H2 type) family protein5941e-061
AT1G02030.1 zinc finger (C2H2 type) family protein3305e-031
AT3G19580.1 AZF2 (ARABIDOPSIS ZINC-FINGER PROTEIN 2); DNA binding / nucleic acid binding / transcription factor/ transcription repressor/ zinc ion binding2509e-022
AT3G19580.2 AZF2 (ARABIDOPSIS ZINC-FINGER PROTEIN 2); DNA binding / nucleic acid binding / transcription factor/ transcription repressor/ zinc ion binding2509e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information