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Information for unigene UN42307
| FASTA Sequence |
| Unigene ID: UN42307 | Length: 782 |
| SNP | TCAAGAAAGCCGGTCAGCCCGCAAAGCCCAAGGAGCAGCCTAAGAAAAAGGAAGCCCCTGCAGCTGAGGCACCTAAGCCTGTCGAA
GAGGAAGAGGCGCCAAAGCCAAAAGCAAAGAACCCTCTTGACTTGCTACCACCAAGCCCAATGGTTCTCGATGAGTGGAAGAGGCT
TTACTCCAACACCAAATCTAACTTCCGTGAGGTTGCTATTAAAGGGTTCTGGGACATGTATGACCCAGAGGGATACTCACTATGGT
TCTGTGACTACAAGTACAACGACGAGAACATGGTGTCCTTTGTCACGCTCAACAAGGTAGGAGGGTTCCTTCAGCGCATGGACTTG
GCACGTAAATACGCCTTTGGAAAGATGCTTATCTGCGGGTCAGAGGGTCCGTTCAAGGTGAAGGGTTTGTGGTTGTTCCGTGGACC
AGAGATCCCCAAATTCGTGATGGACGAGGTGTATGACATGGAGCTTTACGCGTGGACTAAGGTTGACATCTCTGACGAAGCTCAGA
AGGAGCGTGTTAGCCAGATGATTGAAGACGCAGAGCCATTTGAAGGTGAAGCTCTCTTGGACGCCAAGTGCTTCAAGTGAAAAAGA
TAATCTACTCTGTAGTGTTCTTGCTCTATGACTTTTGTTTTTCAAATCTTGTGTGGTTGCTTATACTGGATTTTTTCCTAATTAAT
ACTTCTTTCTTTTACCTTTTTGTTGTTGTTTATGTTTCTATTTTGGCTGTGACATCAATTTAATATGTTATACGATACAGTGTGGT
TATGTTCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_563848 elongation factor EF-1 gamma subunit [Arabidopsis thaliana] | 1024 | 3e-109 |
| AAL87298 unknown protein [Arabidopsis thaliana] | 1024 | 3e-109 |
| XP_002889762 hypothetical protein ARALYDRAFT_471063 [Arabidopsis lyrata subsp. lyrata] | 1024 | 3e-109 |
| NP_176084 elongation factor EF-1 gamma subunit [Arabidopsis thaliana] | 1009 | 2e-107 |
| AAK59587 putative elongation factor 1B gamma [Arabidopsis thaliana] | 1009 | 2e-107 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04487 Probable elongation factor 1-gamma 1 | 1024 | 1e-110 |
| Q9FVT2 Probable elongation factor 1-gamma 2 | 1009 | 7e-109 |
| Q9ZRI7 Elongation factor 1-gamma 1 | 892 | 3e-095 |
| Q6YW46 Elongation factor 1-gamma 2 | 889 | 6e-095 |
| Q5Z627 Elongation factor 1-gamma 3 | 862 | 8e-092 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DHI9 AT1G09640 protein | 1024 | 2e-109 |
| B7SDI2 Elongation factor 1-gamma | 899 | 6e-095 |
| B8AE83 Putative uncharacterized protein | 896 | 1e-094 |
| Q0E2Q7 Os02g0220500 protein | 896 | 1e-094 |
| B8AE84 Putative uncharacterized protein | 892 | 4e-094 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G09640.1 elongation factor 1B-gamma, putative / eEF-1B gamma, putative | 1025 | 9e-112 |
| AT1G57720.1 elongation factor 1B-gamma, putative / eEF-1B gamma, putative | 1010 | 5e-110 |
| AT1G57720.2 elongation factor 1B-gamma, putative / eEF-1B gamma, putative | 1010 | 5e-110 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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