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Information for unigene UN42319
| FASTA Sequence |
| Unigene ID: UN42319 | Length: 660 |
SSR | | GGACTTTCACTTCTTCTTCCATCTTTCATGTGTGAGAGAGAGAGAGTGAGTAGAATTCTGAAGATGAGTACGAGAGGAAGCAAAGC
GGAAGGGAAGAGGATTTTAAGAGACATGAGTGAGGAAGATGAGGATACATCTGAAGAGAAAGAAGATGATGATGAAGATGAAGAAG
AAGTGGCTTTGGAAAAGAAGCAGAAAGGCAAAGCTACTACTACAAGTAGTAGCAGTGGTACTGGAGCTTGTCAAGTGGAGAGATGT
ACTGCAGATTGAGCAGAGCCAAACAATACCACAAACGACACAAAGTCTGCGAGTTTCATGCCAAAGCTCCTCTTGTTCGGATCTCT
GGTCCTTACCAACGTTTCTGCCAACAATGTAGCAGGTTTCATGAGCTAGGTGAGTTTGATGACACCAAGAGGAGTTGCAGGAGACG
CTTAGCTGGACACAATCAGAGAAGGCGTAGAAACACAACTCAACAATAAATAAAAAAAACATGTGAAACGTCTCATGAACTACTAG
GCTTTGCTTGCTCTCTTCTGTCAGTCTCTTTGTAGTCTCTCTGTTTCTTCATATTTGCCTGTAATCTCTAGCTATCTGCTAAAACC
TAAGACATCAATCTGTATCTGTTTTGCAACCCATTGAGGAGACAGCTAATAATAAGCT
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002879473 hypothetical protein ARALYDRAFT_482334 [Arabidopsis lyrata subsp. lyrata] | 325 | 2e-028 |
| CAB94233 Squamosa promoter binding protein-like 3 [Arabidopsis thaliana] | 313 | 6e-027 |
| NP_565771 squamosa promoter-binding-like protein 3 [Arabidopsis thaliana] | 313 | 6e-027 |
| AAM67271 putative squamosa-promoter binding protein [Arabidopsis thaliana] | 313 | 6e-027 |
| XP_002280052 PREDICTED: hypothetical protein [Vitis vinifera] | 299 | 2e-025 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P93015 Squamosa promoter-binding-like protein 3 | 313 | 3e-028 |
| Q38741 Squamosa promoter-binding protein 1 | 286 | 4e-025 |
| Q01JD1 Squamosa promoter-binding-like protein 7 | 273 | 1e-023 |
| Q7XT42 Squamosa promoter-binding-like protein 7 | 273 | 1e-023 |
| Q38740 Squamosa promoter-binding protein 2 | 271 | 2e-023 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RBB6 Squamosa promoter-binding protein, putative | 297 | 3e-025 |
| B9RVW3 Squamosa promoter-binding protein, putative | 295 | 5e-025 |
| Q52UU1 Squamosa promoter binding-like protein | 295 | 5e-025 |
| B9N3H7 Putative uncharacterized protein | 290 | 2e-024 |
| B9HZS5 Predicted protein | 289 | 2e-024 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G33810.1 SPL3 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 3); DNA binding / transcription factor | 313 | 3e-029 |
| AT1G53160.2 SPL4 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 4); DNA binding / transcription factor | 264 | 1e-023 |
| AT1G53160.1 SPL4 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 4); DNA binding / transcription factor | 264 | 1e-023 |
| AT3G15270.1 SPL5 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 5); DNA binding / transcription factor | 264 | 1e-023 |
| AT1G69170.1 squamosa promoter-binding protein-like 6 (SPL6) | 258 | 6e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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