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Information for unigene UN42347

FASTA Sequence
Unigene ID: UN42347Length: 717 SSR 
GGGTTCATCGATCATTCTTCGTTTTATCTTATCTCCGGCGATAATGGAATCTCACGGAAACGCAAGCGACAAGCAATCTCAATCTC
TTTACCCTACTGTCGACATGTCGAATCCCGAAGCTCCTCTTAACCCTACCTCCTCCTCCTCCTCTTCTACTACTGCTACTAACCTC
TATCCTTCCCTCGACATGAACGATCTCGCTCGTGATCTCTTCCCCGAACAACCGGAGACGACGACTTCCACCGTCCCCGTCTCAGC
TCCTCCCGCCGCGACGGAGGAGGTGATTCTGAAAATCTCCGGCGCGATACTCCACCTCATCGACAAATCATACAGCGTCGAGCTCG
CTTGCGGCGACCTCACGATCATCCGTATCGTTCAGGACGGAAACGTCGTCACCGTTCTCGCTCGCGTCGCCGACGAGATTCAGTGG
CCGTTGACCAAGGACGAGAACTCCGTCAAGGTCGATGAGTCTCACTACTTCTTCACCCTCCGTCCAGCTAAAGATTTCGGAGGACA
TGACTACTCGAGCGACGAAGACGAAGGAGTGAAGAAGCAGCGAGAAGAGAACGAAATGTTGAACTACGGACTCACGATTGCTTCCA
AGGGTCAAGAGCATTTGCTGGAGGAGCTCGAGAAGATCTTGGAGGATTACAGCTGTTTCACGGTGCAGCAAGTGTCGGAAGAGGCG
AAGAACAGGGGAAAGGGGTGTGGGATGTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002886130 early-responsive to dehydration 7 [Arabidopsis lyrata subsp. lyrata]8145e-085
NP_179374 senescence/dehydration related protein [Arabidopsis thaliana]7959e-083
AAM65608 putative senescence-associated protein 12 [Arabidopsis thaliana]7959e-083
BAB63916 ERD7 protein [Arabidopsis thaliana]7312e-075
NP_190693 Senescence/dehydration-associated protein-like protein [Arabidopsis thaliana]5654e-056

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O48832 Probable senescence related protein7956e-083
Q8LA30 Putative senescence-associated protein 127956e-083
Q94II1 ERD7 protein (Fragment)7312e-075
Q9SD22 AT3g51250/F24M12_2905691e-056
B5TV63 Senescence-related protein5294e-052

Arabidopsis top hits (Blast detail)Scoree value
AT2G17840.1 ERD7 (EARLY-RESPONSIVE TO DEHYDRATION 7)8035e-086
AT4G35985.1 senescence/dehydration-associated protein-related5912e-061
AT3G51250.1 senescence/dehydration-associated protein-related5696e-059
AT4G15450.1 CONTAINS InterPro DOMAIN/s: Senescence-associated (InterPro:IPR009686); BEST Arabidopsis thaliana protein match is: senescence/dehydration-associated protein-related (TAIR:AT3G21600.1); Has 81 Blast hits to 81 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).1701e-012
AT3G21600.1 senescence/dehydration-associated protein-related1663e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information