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Information for unigene UN42367

FASTA Sequence
Unigene ID: UN42367Length: 768 SSR 
TTTTTGTCCAGGCTGCTGCTGCTGCTTTTTAAGATAAGAGAATGAAGCACAACAATGAGATCCAAGGCTCACACTTCAGGAAGCAC
TGGCAGAACAATGTTAAAACATGGTTCAACCAACCTGCCCGGAAAACCATAAGAAGAGTTGCGAGACAGGAGAAGGCAGTGAAGAT
CTTCCCTCGTCCCACCTCTGGGCCTCTCCGTTCTGTTGTTCACGCACAGACTCTTAAGTACAACATGAAAGTCAGAGCCGGTAAAG
GCTTCTCTCTCGAGGAGCTTAAGGCTGCTGGTATCGCAAAGAAGTTGGCTCCAACGATTGGAATCTCAATTGATCACCGTCGTAAG
AACCGTTCCTTGGAGAGTCTTCAATCCAATGTTCAAAGGTTAAAGACCTACAAGGCCAAGTTGGTTGTCTTCCCTCGCCGATCCCG
TGTAGTCAAGGCTGATGATTCTACTCCTGAGGAGCTTGCTAATGCAACTCAACTCCAAGGAGATTACATGCCTATCTCTAGAGAGA
AGGTTGCGATGGAGCTTGTGAAAGTGACTGCTGATATGAAGACATTCAAGGCTTATGACAAGATCCGTCTTGAGCGCACTAACAAA
CGCCATGCTGGTGTCAGAGCCAAGAGAGCCGCCGATGCTGAGAAAGAAGAGAAGAAATAAGTTATTGATTAAGCTTTAAGACTTTC
AATCCATTTTTGAATCCTGCTTCTTGATTTTGTTTAAGACTCTTGTTTTCATGGGATTTTATCAAGCCTTAAATCTGTGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874151 60S ribosomal protein L13 [Arabidopsis lyrata subsp. lyrata]9356e-099
NP_197778 60S ribosomal protein L13-3 [Arabidopsis thaliana]9212e-097
P41129 RecName: Full=60S ribosomal protein L13-2; AltName: Full=Cold-induced protein C24B9015e-095
XP_002877641 ATBBC1 [Arabidopsis lyrata subsp. lyrata]9007e-095
NP_190470 60S ribosomal protein L13-1 [Arabidopsis thaliana]8999e-095

Swiss-Prot top hits (Blast detail)Scoree value
Q9FF90 60S ribosomal protein L13-39211e-098
P41129 60S ribosomal protein L13-29012e-096
P41127 60S ribosomal protein L13-18994e-096
P41128 60S ribosomal protein L13-18896e-095
Q9SMT4 Putative 60S ribosomal protein L13-28108e-086

TrEMBL top hits (Blast detail)Scoree value
B9DGA4 60S ribosomal protein L138996e-095
A1YMY6 60S ribosomal protein L138881e-093
B7FGS0 60S ribosomal protein L138647e-091
B7FGV8 60S ribosomal protein L138558e-090
A9PAV6 60S ribosomal protein L138522e-089

Arabidopsis top hits (Blast detail)Scoree value
AT5G23900.1 60S ribosomal protein L13 (RPL13D)9228e-100
AT3G49010.1 ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1); structural constituent of ribosome9003e-097
AT3G49010.2 ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1); structural constituent of ribosome9003e-097
AT3G49010.3 ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1); structural constituent of ribosome9003e-097
AT3G49010.4 ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1); structural constituent of ribosome8852e-095

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information