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Information for unigene UN42368
| FASTA Sequence |
| Unigene ID: UN42368 | Length: 855 |
SSR | | GGCTCTCTCCTCGGAGTAAAAAAAAGACTTGTTGCCTCGCCGCTGTTTGCCATTCTCTTTTCTGTGGACGAAACTCAACCTTTAAA
AGAAGGAACCAGAGAACGAGAGCCAGATATAGTCTGAGAGAGAGAGAGAGCTCGCTTGTCTCTGAAAGAATCCACAAAAGATATTA
TGGCATTGAAGCTTAACCATCTGGCATCTCAGCCTTACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTACTTTCAGATCTCCC
AAGTTCCTCTGCCTCGCTTCTTCTTCTCCCGCTCTCACCTCCAAGGAGGTTGAGACTTTGAAGAAGCCATTCACCCCACCAAAGGA
AGTGCACCTTCAAGTCCTGCACTCCATGCCACCCCAGAAGATCGAGATCTTCAAATCTATGGAAGGCTGGGCCGAGCAGAACCTTC
TAACTCATCTCAAGGACGTGGAGAAGTCGTGGCAGCCCCAGGACTTCTTACCCGACCCTGCATCCGACGGGTTCGAAGATCAGGTC
AGAGAGTTAAGAGAGAGGGCGAGGGAGCTCCCTGATGATTACTTTGTTGTTCTGGTGGGTGACATGATCACGGAAGAAGCGCTTCC
GACCTATCAAACCATGCTGAACACTTTGGATGGAGTGAGGGATGAAACTGGTGCTAGCCCCACTTCATGGGCTATTTGGACTAGAG
CTTGGACTGCAGAAGAGAACCGACATGGTGATCTTCTCAATAAGTACCTTTACTTGTCTGGTCGTGTTGACATGAGGCAGATTGAA
AGACCATTCAGTACTTGATTGGTTCAGGAATGGATCCAAGGACAGAGAACAATCCTTACCTTGGCTTTATCTACACTTCGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| P29108 RecName: Full=Acyl-[acyl-carrier-protein] desaturase, chloroplastic; AltName: Full=Stearoyl-ACP desaturase; Flags: Precursor | 1029 | 9e-110 |
| AAD40245 plastidic delta-9-stearoyl-acyl-acyl carrier protein desaturase [Brassica juncea] | 1003 | 9e-107 |
| BAJ34062 unnamed protein product [Thellungiella halophila] | 995 | 8e-106 |
| CAA52786 Stearoyl-acyl carrier protein desaturase [Brassica napus] | 990 | 3e-105 |
| XP_002880063 hypothetical protein ARALYDRAFT_903770 [Arabidopsis lyrata subsp. lyrata] | 979 | 6e-104 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P29108 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 1029 | 4e-111 |
| Q01771 Acyl-[acyl-carrier-protein] desaturase, seed specific, chloroplastic | 972 | 2e-104 |
| P22337 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 840 | 3e-089 |
| P32061 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 809 | 1e-085 |
| Q42770 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 790 | 2e-083 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9XQR7 Acyl-[acyl-carrier-protein] desaturase | 1003 | 6e-107 |
| Q39355 Acyl-[acyl-carrier-protein] desaturase | 990 | 2e-105 |
| Q6DUV7 Acyl-[acyl-carrier-protein] desaturase | 976 | 9e-104 |
| O22832 Acyl-[acyl-carrier-protein] desaturase | 973 | 2e-103 |
| Q94AE9 Acyl-[acyl-carrier-protein] desaturase | 973 | 2e-103 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G43710.1 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 973 | 1e-105 |
| AT2G43710.2 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 968 | 4e-105 |
| AT3G02630.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 717 | 6e-076 |
| AT5G16240.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 688 | 1e-072 |
| AT3G02610.1 acyl-[acyl-carrier-protein] desaturase/ oxidoreductase/ transition metal ion binding | 622 | 6e-065 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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