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Information for unigene UN42383

FASTA Sequence
Unigene ID: UN42383Length: 633 SSR 
GGGCCGCCGCTTCTTCTTTTCAGGTAAGTAGCAGATAACCGAAAAGATGGGACGTGTCCGAACCAAGACCGTGAAGAAATCATCTC
GTCAAGTCATCGAGAAGTACTACTCTCGCATGACGCTCGACTTCCACACCAACAAGAAGATCCTCGAAGAAGTCGCAATCATCCCT
TCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCCACCCATTTGATGAAACGTATCCAGAAGGGACCGGTCCGTGGCATCTCGCT
CAAACTCCAAGAGGAAGAGCGTGAGCGCCGCATGGACTTTGTGCCCGATGAGTCTGCCATCAAGACCGATGTGATCAAGGTCGACA
AGGAGACGCTAGAGATGCTTGCTTCCCTTGGTATGTCTGACGCTCATGGCTTCTCTGAAGTCGAGGCACAGGCTGCACCTTCTTTC
AGCAGGCCACCAAGAAGGTTCTGAGGAGGAGGTTGTTGTTGTTGTTGTTATCAGTCGAATCAAGAGAGAAATCTTTAGATTGGCTG
TTTTTGTTTTGATGTTAGGGACGAAAGACTTACTGTTTTGAAATGTTTATTGTTTCTTCTGATTGGAGATTTATGTCCTAAACTGA
AAGTTATACACTTTTTCTATGGTTTTATGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882688 40S ribosomal protein S17 [Arabidopsis lyrata subsp. lyrata]5941e-059
XP_002871114 40S ribosomal protein S17 [Arabidopsis lyrata subsp. lyrata]5922e-059
NP_178520 40S ribosomal protein S17-1 [Arabidopsis thaliana]5814e-058
NP_565320 40S ribosomal protein S17-2 [Arabidopsis thaliana]5806e-058
NP_196100 40S ribosomal protein S17-4 [Arabidopsis thaliana]5806e-058

Swiss-Prot top hits (Blast detail)Scoree value
P49205 40S ribosomal protein S17-15812e-059
Q9SJ36 40S ribosomal protein S17-25803e-059
Q9LZ17 40S ribosomal protein S17-45803e-059
Q9SQZ1 40S ribosomal protein S17-35785e-059
P49215 40S ribosomal protein S175472e-055

TrEMBL top hits (Blast detail)Scoree value
B9DGM0 AT5G04800 protein5804e-058
A5BHY1 Putative uncharacterized protein5492e-054
Q3HRX4 40S ribosomal protein S17-like protein5492e-054
A9NP61 Putative uncharacterized protein5454e-054
A9PA24 Putative uncharacterized protein5411e-053

Arabidopsis top hits (Blast detail)Scoree value
AT2G04390.1 40S ribosomal protein S17 (RPS17A)5822e-060
AT2G05220.1 40S ribosomal protein S17 (RPS17B)5812e-060
AT2G05220.2 40S ribosomal protein S17 (RPS17B)5812e-060
AT5G04800.1 40S ribosomal protein S17 (RPS17D)5812e-060
AT5G04800.2 40S ribosomal protein S17 (RPS17D)5812e-060

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information