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Information for unigene UN42385

FASTA Sequence
Unigene ID: UN42385Length: 613 SSR 
GGAACCGTCTCAGACCTCTTCGTAACCCGATTTCTCTCTCTCTCTCTGAAGTTCACAGAGAACGTTTACAGTGACCACCAGTTGGG
ATTACAAATCTTTTCGCCCGAATAATCAGGAAGATGAGTGGTGGTGAAGTTGTCCTAACTGCTGCTAGAGTCTACCGTGAGCTTCT
TAAAGGAGTTGCGAAACATGTTGGCAAAGAAGACCACAAGTCTCATTTCACAGATTTTGTAAAGAACGAGTTTCGGAAGGATGCAC
ACTCAGTCGAGAAAATCACCCTTGCCCGGAACTACACTTATCTTCTTAATAGCATTCACTCTCACAAGGATCTGTTGTTTTCATAC
AACATTGCAGTTGATAGAACTGAAGAAATGAAGCGAGTGCTTGGCAAATCTGCAGCTAGTGTTGGGCTTCGTCTTCCCGAGGTTTA
CCAGCCTTGATCATCATCCCACTTTCCTCCTTGTCTTTCCTCTTTGTTTCCTTTACAGATCTTAGGTAACTTTGGAATAAGTTTGT
CACTCTTTGTAGCCAGACAGATTTGAGATGCATGGATCACAATTTCTTTTTATTTTGTTACCACATTCGTTCTGGGATAAAAAAAA
ACGGTACCAGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_200009 uncharacterized protein [Arabidopsis thaliana]4417e-042
XP_002864465 hypothetical protein ARALYDRAFT_495744 [Arabidopsis lyrata subsp. lyrata]4301e-040
XP_002864143 hypothetical protein ARALYDRAFT_918234 [Arabidopsis lyrata subsp. lyrata]4165e-039
ABM54450 unknown [Brassica juncea]4122e-038
XP_002523900 conserved hypothetical protein [Ricinus communis]3621e-032

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FJ96 At5g519604415e-042
A1Z284 Putative uncharacterized protein4121e-038
B9SD31 Putative uncharacterized protein3627e-033
C6T1D6 Putative uncharacterized protein3332e-029
B9HLY5 Predicted protein3286e-029

Arabidopsis top hits (Blast detail)Scoree value
AT5G51960.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP synthase assembly factor FMC1, mitochondrial (InterPro:IPR018471); Has 18 Blast hits to 18 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).4423e-044

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information