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Information for unigene UN42388

FASTA Sequence
Unigene ID: UN42388Length: 973 SSR 
GATACTAGGCAAAGAAAACCTCAATAAAAATGGGGCCTCGTAAGAGTCGTGGCTTACATAACAGCAAAACTTGATCATGTTCCAAA
CAAAGCGCGAGAGAGAGAGAGAGCTGTCTGCTAAAATATTATAACCAAGATAAACGGCACTGAGATGAAAGAAACAAAAAAAAACA
CATTTTAATATTCGAGATTCGAAATGCTCCTTAAAACTTAGTTAGACTCAATGTGCTTCTTGACGATATTGAGCGCAGTTGTATCC
TCACCGTAGTCCTGAAAACGGCAATCACGAAACACACAGAGATGATGCATTAAGTAAATGACCAGAAGATACAATAACAGATATTT
TCTCATTTAACATGTACTGAGACGAAAAGACAAAATACCTTGACTACAAGACAGGAGCATCCAACAACCTTTCTGGCATTGCCCTC
AGAGTCAATCTTACAGAGCTGAAACAACATCATTAAAAAAAATGTTAACTGAATATTCATTCATTCAGAAAGGTACTGTATATGGA
GATTAAATGACTTACACCAGCCCATTCACCAAGGGTCTTGGCACTTGGAACTGTAAGCAAGTTGATGCTGTGATCAGCGCAGAGAG
CCTTGACGAGCTTCACGTAATCAGGCTGGTTGCAGTCTTCAGCCAAGACACAGAGCTGAGCCACACGCTTCTCAATAAGCTTAGCG
CTCTCATGGAGACCACGTACAACACCACCATGAGCACGAGCTTTCCTAAGAGTCAGCTCCAATGCGGTCAACAAGTCCATGTCCTC
TGGGATGATGGCCGCTGGCTCAGCAACGGGAGGAACAGCAACGGGAGCAGCCTCGTCACTGAATCAGAAAGGATCCAGACAATCAA
AATCCAGAATGTAAGGCTCCATTGTATATATATTCAAGTCCAAAACTAAACAGGCAAGATATTTAATTAATTCAAAAAGCTAAAAT
GGAGCTTAGTCATCACTGATTCCACAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173045 40S ribosomal protein S12-1 [Arabidopsis thaliana]4456e-042
NP_180766 40S ribosomal protein S12-2 [Arabidopsis thaliana]4303e-040
XP_002887897 predicted protein [Arabidopsis lyrata subsp. lyrata]4043e-037
XP_002890138 40S ribosomal protein S12 [Arabidopsis lyrata subsp. lyrata]3928e-036
XP_002881214 40S ribosomal protein S12 [Arabidopsis lyrata subsp. lyrata]3783e-034

Swiss-Prot top hits (Blast detail)Scoree value
Q9S9P1 40S ribosomal protein S12-14453e-043
Q9SKZ3 40S ribosomal protein S12-24301e-041
Q9XHS0 40S ribosomal protein S123549e-033
Q9SMI3 40S ribosomal protein S122392e-019
Q76I81 40S ribosomal protein S122356e-019

TrEMBL top hits (Blast detail)Scoree value
A9P9I0 40S ribosomal protein S123747e-034
A9PDC2 40S ribosomal protein S123712e-033
B9GT02 40S ribosomal protein S123702e-033
A9PJY6 40S ribosomal protein S123658e-033
A9P9K3 40S ribosomal protein S123641e-032

Arabidopsis top hits (Blast detail)Scoree value
AT1G15930.2 40S ribosomal protein S12 (RPS12A)4452e-044
AT1G15930.1 40S ribosomal protein S12 (RPS12A)4452e-044
AT2G32060.1 40S ribosomal protein S12 (RPS12C)4301e-042
AT2G32060.3 40S ribosomal protein S12 (RPS12C)4301e-042
AT2G32060.2 40S ribosomal protein S12 (RPS12C)4301e-042

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information