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Information for unigene UN42393

FASTA Sequence
Unigene ID: UN42393Length: 911 SSR 
GCATGGACGAAGGTTCCTTGGAAGGTCGCCACGTGTCCAACGAGCGTGATTTGGCCAAACTCTCGTTTCAGATCTTGAACGGTTTG
GCGTATCTCCACGGACGTCATATAGTCCACAGAGACATCAAGCCTTCGAATCTGCTTGTTAACAAGGCGGCTAACGTCAAGATTGC
TGATTTTGGAGTGAGTAGGATCTTGGCTCAGACCATGGATCCCTGCAACTCCTCTGTTGGGACGATTGCTTACATGAGTCCTGAGA
GGATTAATACTGATTTGAATCAGGGGAGGTATGACGGTTACGCTGGGGATATATGGAGCTTAGGTGTTAGCATTCTTGAGTTTTTC
TTGGGGAGGTTTCCTTTCAATGTGAGTAGGCAGGGGGATTGGGCGAGTCTCATGTGTGCTATCTGTATGTCTCAGCCTCCCGAGGC
TCCGGCGAGTGCGTCTCCGGAGTTTCGGCATTTTATTTCGCGTTGCTTGCAGAGGGAACCGGGGAGGAGGATGACGGCGAGTCAGC
TTTTGAGGCATCCTTTTATACTTAGAGGTGCGAGTCAGGGGCAGAACAGGTCTCCTCAGAATCCGCATCAGCTCTTGCCTCCTCCT
CGTCCTCTCTCTTCCTCTTCTTCTTCTTCTTCTTCTGCTGCTTCGTCCCCAATGACGTAGTGATTACTGGTTCTTGGGTCAGTCTC
CTCCTTTGTACTTTTGAGTTCTTGGTTTACTCTTGTTGTCCGATTTTTGCGTAAGCTTTGCGTAACTTTATCAAGAAGGGCAAAAC
GACTTTGCTTTTGTAATCCCAAACTGTAGCTTTGTTGAATTTTCATAAAATGGTTTATGCCTTTTTCTTTGTTCTTTTGCAATTTA
TGCTTCGCCGTTTGCATCTTAAGCCTCGTTAAAAAATGTTGGTTTCTATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33745 unnamed protein product [Thellungiella halophila]9402e-099
ABF55664 double MYC-tagged mitogen activated protein kinase kinase 4 [synthetic construct]9375e-099
NP_175577 mitogen-activated protein kinase kinase 4 [Arabidopsis thaliana]9366e-099
XP_002891650 hypothetical protein ARALYDRAFT_474280 [Arabidopsis lyrata subsp. lyrata]9277e-098
BAJ34264 unnamed protein product [Thellungiella halophila]8391e-087

Swiss-Prot top hits (Blast detail)Scoree value
O80397 Mitogen-activated protein kinase kinase 49363e-100
Q8RXG3 Mitogen-activated protein kinase kinase 58181e-086
Q5QN75 Mitogen-activated protein kinase kinase 13995e-038
Q9FJV0 Mitogen-activated protein kinase kinase 63673e-034
Q9S7U9 Mitogen-activated protein kinase kinase 23548e-033

TrEMBL top hits (Blast detail)Scoree value
Q93WR8 MEK map kinase kinsae8235e-086
B9HK72 Predicted protein8182e-085
Q6QMT4 Mitogen-activated protein kinase kinase 57993e-083
Q7XAC9 Mitogen-activated protein kinase kinase7976e-083
B9HVE0 Predicted protein (Fragment)7967e-083

Arabidopsis top hits (Blast detail)Scoree value
AT1G51660.1 ATMKK4 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4); MAP kinase kinase/ kinase9372e-101
AT3G21220.1 ATMKK5 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5); MAP kinase kinase/ kinase8252e-088
AT1G18350.1 ATMKK7; MAP kinase kinase/ kinase4892e-049
AT1G73500.1 MKK9 (MAP KINASE KINASE 9); MAP kinase kinase/ kinase/ protein kinase activator4873e-049
AT1G32320.1 ATMKK10; MAP kinase kinase/ kinase3932e-038

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

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