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Information for unigene UN42416

FASTA Sequence
Unigene ID: UN42416Length: 911 SSR 
GGAATCTCTATGTGGAGCATCTAACTTTCTTCTGTCGATCAAAGCTAAGTAAAAAAAAAAAAATTTAATCTTTGCGTCACTTCTCT
AGGGTTCTTTTCTTCTCCAAGCTTCATCTACTAAACATGAGTCGTCATCCTGAAGTGAAGTGGGCTGAGACCACTGACAAGATCTT
CCTCACTGTAGTATTAGCTGATTCCAAGGAGACCAAAGTCAATCTAGACCCTGAAGGTGTCTTTGATTTCTCTGCAAAAGCTGGTC
CCGAGAACCACGTCTATGAACTTAAACCCTAGCTTCACGGTAAAGTCAATGTAGAGGAAAGCAAGATCAATATTGGAGTAAGAAGC
ATCTTCTGCATAATAGAGAAAGCAGAGCCCGAAAGGTGGAATAAGCTAGTCCGTGGAGGGAAAGCGCCTCACTATGTCAAGATTGA
TTGGGACAAGTGGGTTGATGAGGACGACGAAGGCACCGCTGGTGCTGGAGATATGGATATGGGAGGAATGGGTGGAATGGATTTCT
CGAACTTTGGTGGAATGGGTGGTATGGAAGGACTTGGCGGCATGGGTGGCATGGGTGGACTTGGTGGCGTGGCCGGACTTGAAGGA
CTTGGCGGCATGGGTGGCATGGGAGGCATGGGTGGTATGGGTGGCATGGAAGAGTTTGAAGACAGTGATGATGAAGAATTTGCAAA
ACCAGGAGACAAAAAAGATGAAGCCGTCAAGGAAGAAGCGAAACCAGTAGATGTCAAGGAAGACAAATGAAGAAGATGCTGTTCGT
TCCAGAGATGAACTCATTAATGTGTTTTGGTTTCAAGTTTATTATTAGCTAAGGGTTATTATTATTATTAGCTTTTTGAGTTTATT
AAACCCTCTGTTTTACTTCCTCTTTTCTAAAATGTTTTGCTTTTATGGATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892131 predicted protein [Arabidopsis lyrata subsp. lyrata]7951e-082
CAC16575 p23 co-chaperone [Arabidopsis thaliana]7531e-077
NP_192154 HSP20-like chaperone [Arabidopsis thaliana]7531e-077
NP_001154201 HSP20-like chaperone [Arabidopsis thaliana]7531e-077
XP_002872836 predicted protein [Arabidopsis lyrata subsp. lyrata]7261e-074

Swiss-Prot top hits (Blast detail)Scoree value
Q6YYB0 Uncharacterized protein Os08g03595006711e-069
P0C8Z0 Uncharacterized protein OsI_0279406551e-067
Q5RBM8 RNA-binding protein 122033e-015
Q9NTZ6 RNA-binding protein 122015e-015
Q8R4X3 RNA-binding protein 122015e-015

TrEMBL top hits (Blast detail)Scoree value
Q8L7U4 AT4g02450/T14P8_57537e-078
Q9FT78 P23 co-chaperone7537e-078
O81288 Putative uncharacterized protein AT4g024506873e-070
B7FF72 Putative uncharacterized protein (Fragment)6301e-063
C5YKA7 Putative uncharacterized protein Sb07g0151406085e-061

Arabidopsis top hits (Blast detail)Scoree value
AT4G02450.2 glycine-rich protein8719e-094
AT4G02450.1 glycine-rich protein8592e-092
AT1G49750.1 leucine-rich repeat family protein1567e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  100%

Unigene MembersMember information