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Information for unigene UN42421

FASTA Sequence
Unigene ID: UN42421Length: 796 SSR 
TTTTTTTCTGAATTTTCATTTTTATTGATATGACTGTCACCAGCGCATTATAGCATATGCTTCTCTCATCATCAAAAAGCACAGCC
ACAGAGCTTCAGCATTTTCATTCTCACAAAACTATTATTATTCATCATCACACCAAAATCCAAAAAAAGGAAGAGACACAGAAGAG
AAAAGAGAGAGAGAGAGACATTCATCATCATCAAACCATCTTCCATCTTTCCTTCCAATGGATCTAATCATATCTTCTTGATTCTT
CCTCCAAGGGGCTGAGATTTGAAGGAGTGACAAAGGAAGAATCTTTTATTTAAAAAGAAAAAAAACAAGTTCAAGTGTTCCAGAGA
TGGCCACGGTGGGCGTAGAGCCTAGTGCCGCGGTTAGAGACTCTAATGGAAACGCTGTTACTGATGCTGATAGGTTACCTGAAGAG
ATGAATCACATGAAAATTCAAGATGATAAAGAAATGGAAGCTACAATCGTCAACGGCAATGTCACAGAGACTGGTCATATTATAGT
GACTACCATTGGTGGAAGAAACGGCCAACCTAAGCAGACGATCAGTTACATGGCGGAGCGTGTTGTTGGACACGGTTCCTTTGGCG
TTGTGTTCCAAGCGAAGTGTTTAGAGACAGGAGAAACTGTAGCGATAAAGAAAGTGTTGCAAGACGTAGGTACAAGAACCGTGAGC
TACAAACAATGAGGCTGCTCGACCATCCGAACGTAGTCTCTTTGAAACACTGCTTCTTCTCGACCACCGAGAAAGACGAGCTTTAT
CTCAACTTAGTCCTCGAATACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABG74911 AtSK12-like protein [Brassica napus]5234e-051
NP_187235 Shaggy-related protein kinase gamma [Arabidopsis thaliana]4992e-048
XP_002882438 hypothetical protein ARALYDRAFT_477878 [Arabidopsis lyrata subsp. lyrata]4992e-048
BAJ34573 unnamed protein product [Thellungiella halophila]4957e-048
AAM62970 shaggy related protein kinase ASK-GAMMA [Arabidopsis thaliana]4949e-048

Swiss-Prot top hits (Blast detail)Scoree value
P43289 Shaggy-related protein kinase gamma4991e-049
P43288 Shaggy-related protein kinase alpha4237e-041
P51137 Glycogen synthase kinase-3 homolog MsK-14211e-040
P51139 Glycogen synthase kinase-3 homolog MsK-34173e-040
Q8VZD5 Shaggy-related protein kinase epsilon4112e-039

TrEMBL top hits (Blast detail)Scoree value
A6XFT5 AtSK12-like protein5233e-051
Q0WUV3 AT3G05840 protein4992e-048
C7AE95 Glycogen synthase kinase4533e-043
C6T8S1 Putative uncharacterized protein4472e-042
B0FSK1 Serine/threonine protein kinase4435e-042

Arabidopsis top hits (Blast detail)Scoree value
AT3G05840.2 ATSK12; protein kinase/ protein serine/threonine kinase4991e-050
AT3G05840.1 ATSK12; protein kinase/ protein serine/threonine kinase4991e-050
AT5G26751.1 ATSK11; protein kinase/ protein serine/threonine kinase4236e-042
AT5G14640.1 SK13 (SHAGGY-LIKE KINASE 13); ATP binding / protein kinase/ protein serine/threonine kinase4112e-040
AT2G30980.1 ASKdZeta (Arabidopsis SHAGGY-related protein kinase dZeta); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase3035e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
91  50%

Unigene MembersMember information