Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN42451

FASTA Sequence
Unigene ID: UN42451Length: 666 SSR 
TCAGATCTCCGAGTTCAAGGAAGCCTTCAGCTTATTCGACAAAGATGGTGACGGTTGCATTACCACCAAGGAGCTAGGAACTGTGA
TGCGTTCTCTAGGACAGAACCCAACCGAAGCAGAGCTCCAAGACATCAACGAAGTTGACGCTGACGGTAACGGCACCATCGATTTC
CCCGAGTTCTTGAACCTCATGGCTCGTAAGATGAAGGACACCGACTCCGAGGAAGAGCTCAAGGAAGCTTTCCGTGTTTTCGACAA
GGACCAGAACGGTTTCATCTCGGCTGCTGAGCTCCGTCACGTGATGACAAACTTAGGCGAGAAGCTCACGGACGAAGAGGTCGATG
AGATGATCAAGGAAGCTGATGTTGATGGTGATGGTCAGATTAACTATGAGGAGTTTGTTAAGGTCATGATGGCTAAGTGATGTGGT
TTTGGTTTTGGTTTGCCTCTCTCTCTCTCTTACTAAAACTCTTTTATGTAATTCTTATATTTACTTATGTATGTTCTTAAATTTTT
ATTCATGGGACTCGGTTCTGTTTTCTGGTGGTTTAAGACCAAATGCTATCTCTTTAATGCTTTGTGTCTGAAGTCTTGTCTTTTGT
TTTGTTTTGTAAGTTGTGTAACTTCGTCTAGTTTCGTGGTTTCTTGTTAATTCTAGTAAAGTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180271 calmodulin 5 [Arabidopsis thaliana]6991e-071
NP_850097 calmodulin 5 [Arabidopsis thaliana]6991e-071
AAA32765 calmodulin-3 [Arabidopsis thaliana]6991e-071
XP_002879035 calmodulin-2 [Arabidopsis lyrata subsp. lyrata]6991e-071
XP_002330977 predicted protein [Populus trichocarpa]6962e-071

Swiss-Prot top hits (Blast detail)Scoree value
P25069 Calmodulin-2/3/56995e-073
P62200 Calmodulin-1/11/166961e-072
P62199 Calmodulin-16961e-072
P59220 Calmodulin-76961e-072
P62202 Calmodulin6961e-072

TrEMBL top hits (Blast detail)Scoree value
Q3EBT4 Putative uncharacterized protein At2g27030.36997e-072
Q682T9 Calmodulin6997e-072
Q6LD03 Calmodulin6997e-072
Q6LDG2 Calmodulin6997e-072
A0PH65 Calmodulin6962e-071

Arabidopsis top hits (Blast detail)Scoree value
AT2G41110.1 CAM2 (CALMODULIN 2); calcium ion binding / protein binding7059e-075
AT2G27030.1 CAM5 (CALMODULIN 5); calcium ion binding7059e-075
AT3G56800.1 CAM3 (CALMODULIN 3); calcium ion binding7059e-075
AT2G27030.3 CAM5 (CALMODULIN 5); calcium ion binding7041e-074
AT3G43810.1 CAM7 (CALMODULIN 7); calcium ion binding7022e-074

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information