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Information for unigene UN42504
| FASTA Sequence |
| Unigene ID: UN42504 | Length: 1025 |
SSR | | GGATAAACCACCTTCAGAGAAAATCAATACAATTAAACCTAAAACTTTCGAAAAGTTACTGTTACACAACCCTTTCGTTCAAATGT
GCGGAGGAGCAGTTATTTCCGAGTACATAACGCCGTCGCGATCCGGCAGATCGTCCTGGAGACGCGAAAACGTCGTCGACTTGACA
CTCGACGATTTCGAGGGAGAAATCGATGAATTCGAGTGGGAGAACGATGAAATCTACAGATTCTCAACGGCCAAGCCTGCTTCTCT
TCTCCGTCGCTCTTCTTCTCCACAAGAAGATGTGAGGGGGAAGAAGGAGAAGAAGAAGAAGAAGAAGAGTAGCGAGTATAGAGGAA
TCAGGAGAAGGCCATGGGGAGATGGGCGGCTGAGATTCGCGATCCGATAAAAGGAGTTCGAGTTTGGCTGGGGACGTTCAACACTG
CAGAAGATGCTGCGAGAGCTTATGACCTTGAAGCTAAGAGGATCCGTGGAGCCAAAGCTAAGCTCAATTTCCCTAACGAATCACCT
TCAAGAAAACGTAAAGCTTCTTCTTCTTCACCAAAACAGCCTCCTCAGGTTAAGGTAGAGGAGAAGCGTGAGGAGGTTGGAGTGGC
GTGTAGTAGCCTGTGGGAAGGGGACACGATTCAGGTCGATACGCAGTGGCTTGAAGATGCCATCAAGGGCGGTGAGAAGGGGGAGA
AGAGACACAAGGGCTATGATGGTGATGGGGAAGGTGACGACGTGAATGCTCAGCTTTCGGAGGAGCTTCTTGCTTTTGAGAAAGAG
ACGGAGTGTTTCTTCCAGATGCCGTTTATGGAGGGGGCAAACTGAGGTTCGTCGTCGTCTGCGACCAGTGTCTTTGAGGGAGATGA
TCTCTTGGATCTTTGGTTTTGAATGGTTCTTTTGTATTCTAATGATCATGAGTCTTTTGGTGTTGTATTTGTACAAGTCAGATTCT
TGTTCGGCTTGTGTGTGTGTATTGACTTATTGTAACTGTGATTCTTCTCCCTTTCAATGTAAAATAGCTTAAGTTTTGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_001117587 ethylene-responsive transcription factor ERF073 [Arabidopsis thaliana] | 463 | 5e-044 |
| NP_001077812 ethylene-responsive transcription factor ERF073 [Arabidopsis thaliana] | 459 | 2e-043 |
| NP_177380 ethylene-responsive transcription factor ERF073 [Arabidopsis thaliana] | 451 | 1e-042 |
| BAC56862 AP2/ERF-domain protein [Solanum tuberosum] | 260 | 2e-020 |
| BAE71206 putative transcription factor EREBP [Trifolium pratense] | 258 | 3e-020 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8H0T5 Ethylene-responsive transcription factor ERF073 | 451 | 6e-044 |
| Q6K7E6 Ethylene-responsive transcription factor 1 | 248 | 2e-020 |
| P42736 Ethylene-responsive transcription factor RAP2-3 | 228 | 4e-018 |
| Q9SSA8 Ethylene-responsive transcription factor RAP2-12 | 220 | 3e-017 |
| Q9LUM4 Ethylene-responsive transcription factor RAP2-2 | 219 | 4e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B3H5K8 Uncharacterized protein At1g72360.3 | 463 | 4e-044 |
| Q84KS7 AP2/ERF-domain protein | 260 | 1e-020 |
| Q2PEZ6 Putative transcription factor EREBP | 258 | 2e-020 |
| D5L0Z5 AP2 domain class transcription factor | 255 | 5e-020 |
| Q3L0R1 Ethylene-responsive element binding protein ERF2 | 253 | 8e-020 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G72360.3 ethylene-responsive element-binding protein, putative | 463 | 2e-046 |
| AT1G72360.2 ethylene-responsive element-binding protein, putative | 459 | 6e-046 |
| AT1G72360.1 ethylene-responsive element-binding protein, putative | 451 | 5e-045 |
| AT3G16770.1 ATEBP (ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN); DNA binding / protein binding / transcription activator/ transcription factor | 228 | 4e-019 |
| AT1G53910.1 RAP2.12; DNA binding / transcription factor | 220 | 3e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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