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Information for unigene UN42505
| FASTA Sequence |
| Unigene ID: UN42505 | Length: 957 |
SSR | | GGCTCCTTGGCTCCTTGAAACATCCTTCTCCTTCTTCCAAGAGATCAATTCCTTAATCGCTAATCTTCGGAGAGAGAGAGAGATTC
AAAAAAGAATGGTGAAGATCTGTTGTATTGGAGCTGGATATGTTGGTGGTCCAACAATGGCAGTGATCGCACTCAAATGTCCACAC
ATTGAAGTAGCAGTCGTTGACATCTCTGTTCCACGTATCAACGCATGGAACAGTGACCAGCTTCCCATCTACGAGCCAGGCCTTGA
AGACATCGTCAAGCAGTGTAGAGGCCAAAACCTCTTCTTCAGCACCGACGTTGAGAAACACGTGCGGGAAGCCGATATCGTCTTTG
TCTCTGTCAACACCCCCACCCAAAACCACTGGTCTCGGAGCTGGCAAAGCTGCGGATCTCACTTACTGGGAGAGTGCTGCTCGTAT
GATCGCCGATGTTTCGGCTTCTGATAAGATCGTCGTTGAGAAATCCACTGTCCCTGTCAAAACGGCTGAAGCCATCGAGAAGATTC
TGATGCATAACAGTAAAGGGATGCGTATGAAGCTACAAAGGATGCACACGCGGTCTGCGTTCTGACCGAGTGGGATGAGTTCAAGT
CATTGGACTACCAGAAGATCTTTGACAACATGCAGAAACCAGCTTTTATCTTCGACGGGAGAAACGTTTTGAATGTGGACAAGTTG
AGAGAGATTGGTTTCATCGTTTACTCCATTGGTAAGCCACTTGATGCATGGCTCAAGGACATGCCTGCTTTTGTCTGAACGAGAAC
AAGGTAATAATAATGATAATCTGGCTCATTCTTTTTCCTTCTACCTTTGATTGTTTCTGTTTTTGCGTTTTGCGTCTTATAACGTC
TACCTTTGTTGTTTGTTTTCTTATATAAGCTCTCGTAATTTTTGTGTTTCAAATTTTGTTGAACAGACTACTACTTTGTATTCGAT
ACATTTGCATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_198748 putative UDP-glucose 6-dehydrogenase 2 [Arabidopsis thaliana] | 461 | 8e-044 |
| AAP21188 At5g39320 [Arabidopsis thaliana] | 461 | 8e-044 |
| XP_002877176 hypothetical protein ARALYDRAFT_905242 [Arabidopsis lyrata subsp. lyrata] | 461 | 8e-044 |
| NP_197053 UDPglucose 6-dehydrogenase [Arabidopsis thaliana] | 459 | 1e-043 |
| XP_002873728 hypothetical protein ARALYDRAFT_488394 [Arabidopsis lyrata subsp. lyrata] | 459 | 1e-043 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FM01 Probable UDP-glucose 6-dehydrogenase 2 | 461 | 4e-045 |
| Q9LIA8 Probable UDP-glucose 6-dehydrogenase 1 | 453 | 3e-044 |
| Q96558 UDP-glucose 6-dehydrogenase | 423 | 9e-041 |
| Q5F3T9 UDP-glucose 6-dehydrogenase | 357 | 4e-033 |
| O70199 UDP-glucose 6-dehydrogenase | 350 | 3e-032 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LF33 At5g15490 | 459 | 9e-044 |
| Q6IVK6 Putative UDP-glucose dehydrogenase 2 | 454 | 4e-043 |
| Q6IVK7 Putative UDP-glucose dehydrogenase 1 | 454 | 4e-043 |
| D2WK25 UDP-D-glucose dehydrogenase | 452 | 6e-043 |
| B9REG0 UDP-glucose 6-dehydrogenase, putative | 444 | 5e-042 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G39320.1 UDP-glucose 6-dehydrogenase, putative | 461 | 3e-046 |
| AT5G15490.1 UDP-glucose 6-dehydrogenase, putative | 459 | 5e-046 |
| AT3G29360.1 UDP-glucose 6-dehydrogenase, putative | 453 | 3e-045 |
| AT3G29360.2 UDP-glucose 6-dehydrogenase, putative | 453 | 3e-045 |
| AT1G26570.1 UGD1 (UDP-GLUCOSE DEHYDROGENASE 1); NAD or NADH binding / UDP-glucose 6-dehydrogenase/ binding / catalytic/ coenzyme binding / oxidoreductase/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor | 436 | 3e-043 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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