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Information for unigene UN42510
| FASTA Sequence |
| Unigene ID: UN42510 | Length: 805 |
SSR | | GGGAAAACAGATAAACAGTGAGGGAGAAAGAAGGATGCAGAATCAGAGGCTGAAACAACAACAAGCAATGATGCAGCAAGCAATGA
TGCAGCAACAACGTCACTCTCTCTATCATCCTAGCCTCATGGCTCCTCCTCCTCCTCAGATGGAGCCTCTGCCAAGTGGAAACCTT
CCTCCTGGTTTTGATCCCAGCACTTGCCGTAGTGTGTATGCTGGAAACATCCGTACGCAGGTCACTGAGGTTCTTCTTCAAGAGAT
TTTTGCTAGCACCGGCCCTGTTGAAAGCTGTAAACTCATCCGAAAGGATAAGTCATCATATGGATTTGTCCACTACTTTGATCAGA
GATCTGCTGGTTTGGCTATCATGTCTCTTAACGGAAGGCATCTATTTGGACAGCCTCAAACCCACTTCCACCACCAGCGCCGGTTC
CAGTCCCTGGTTTGTCCCCAATGGACCTCTTAGCGTATGAGAGGCAACTGGCTCTAGCCAAGATGCATCCTCAGGCTCAACATTTT
TTGAGGCATGTAAATGCAGCTGGAGCAAGTGCAGCTATGTACGATGGTGGGTTTCAGAATGTAGCTGCGGCGCATCAGCAGCTCAT
GTACTACCAGTAATATACTCTGGTCTCTTGGATCCGATGAGATGCTTTTTTCTATCTATTTTTCTTCTTTTTTCTCTTCCTACTTA
ATTTTATCACTTTCTTACTTTTTTTTCTAGACCTTGTTCAGAGTCTTATGTATGTGTGTCTGTCATTTGAAGTCGTTGATTCTATA
TATGCCTAGAATGACATGAAATAAAAGGGAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002894477 hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp. lyrata] | 525 | 2e-051 |
| NP_175810 oligouridylate-binding protein 1A [Arabidopsis thaliana] | 515 | 3e-050 |
| NP_849806 oligouridylate-binding protein 1A [Arabidopsis thaliana] | 515 | 3e-050 |
| ACU17855 unknown [Glycine max] | 511 | 9e-050 |
| XP_002892947 hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp. lyrata] | 508 | 2e-049 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3ECQ4 Putative uncharacterized protein At1g54080.2 | 515 | 2e-050 |
| Q9SYG4 At1g54080/F15I1_16 | 515 | 2e-050 |
| C6T7Q3 Putative uncharacterized protein | 511 | 7e-050 |
| B9ST80 Nucleolysin tia-1, putative | 507 | 2e-049 |
| Q8LAP3 Oligouridylate binding protein, putative | 507 | 2e-049 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G54080.2 oligouridylate-binding protein, putative | 515 | 1e-052 |
| AT1G54080.1 oligouridylate-binding protein, putative | 515 | 1e-052 |
| AT3G14100.1 oligouridylate-binding protein, putative | 507 | 1e-051 |
| AT1G17370.1 UBP1B (oligouridylate binding protein 1B); mRNA 3'-UTR binding | 504 | 3e-051 |
| AT1G17370.2 UBP1B (oligouridylate binding protein 1B); mRNA 3'-UTR binding | 504 | 3e-051 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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