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Information for unigene UN42575
| FASTA Sequence |
| Unigene ID: UN42575 | Length: 812 |
SSR | | TCGCCGTCGTCTCTGCGCGTGAAATGGCGACCTCTTTTCTTCGTAGAAACTTGAACTCAAGACGCTTCCGCTTCATTTCTACATCC
TCTTCTTCTTCTTCTTCCTCACATCGCCGTGTTGTTGTCACTGGTCTAGGAATGGTGACTCCACTTGGAAGAGGCGTTGAGACAAC
ATGGAGGCGTTTGGTCGGTGGAGAAAGTGGGATTAGAGAATTGACACCTGATGATCTCAAGATGAGTTCGTTTGATGAAGAGACAA
AGTTGTATACTTTTGATCAGCTTTCCTCTAAAGTTGCCGCCTTTGTGCCATATGGAACAAACCCAGGTCAATTCGATCAAGCTCTT
TGGCTAAACTCCAAGGCAATTGCGAAGTTCATTGGATATGCTTTATGTGCTGCTGATGAAGCCTTGAGAGATGCAGAGTGGTTACC
AACCGAAGAGGATGAAAAAGAAAGAACAGGAGTCTCTATTGGTGGTGGAATCGGAAGTATAAGTGACATTGTAGAGGCAGCGCAGA
TGATTTGTGAAAAGAGGCTGCGGCGGCTTAGTCCCTTTTTCATCCCAAAGATATTAGTAAACATGGCATCTGGTCACGTGAGCATG
AAGTACGGTTTCCAGGGGCCAAACCATGCTGCTGTGACAGCTTGCGCTACTGGTGCGCACTCTATAGGCGATGCCACTAGGATGAT
CCAGTTTGGAGATGCAGATGTTATGGTAGCAGGTGGAACTGAGTCCAGCATTGATGCTCTTTCCGTTGCTGGATTCTCTAGATCAA
GAGCTTTGTCGACTAAGTTTAATTCATCACCGCAAGAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885760 hypothetical protein ARALYDRAFT_480093 [Arabidopsis lyrata subsp. lyrata] | 1209 | 1e-130 |
| NP_178533 3-oxoacyl-[acyl-carrier-protein] synthase [Arabidopsis thaliana] | 1190 | 2e-128 |
| 1W0I Chain A, Arabidopsis Thaliana Mitochondrial Kas | 1132 | 9e-122 |
| XP_002277197 PREDICTED: hypothetical protein [Vitis vinifera] | 1000 | 2e-106 |
| XP_002528950 3-oxoacyl-[acyl-carrier-protein] synthase, putative [Ricinus communis] | 974 | 2e-103 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8L3X9 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial | 1190 | 8e-130 |
| P56902 3-oxoacyl-[acyl-carrier-protein] synthase 2 | 455 | 1e-044 |
| Q0VCA7 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial | 416 | 5e-040 |
| Q9NWU1 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial | 414 | 8e-040 |
| O94297 Putative 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial | 410 | 2e-039 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SSI1 3-oxoacyl-[acyl-carrier-protein] synthase, putative | 974 | 1e-103 |
| B4FZ85 Putative uncharacterized protein | 870 | 2e-091 |
| C5XXH6 Putative uncharacterized protein Sb04g006630 | 866 | 4e-091 |
| B8ADS0 Putative uncharacterized protein | 856 | 6e-090 |
| A9SRG8 Predicted protein | 709 | 7e-073 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G04540.1 3-oxoacyl-(acyl-carrier-protein) synthase II, putative | 1190 | 7e-131 |
| AT5G46290.1 KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I); catalytic/ fatty-acid synthase/ transferase, transferring acyl groups other than amino-acyl groups | 252 | 4e-022 |
| AT1G74960.2 FAB1 (FATTY ACID BIOSYNTHESIS 1); 3-oxoacyl-[acyl-carrier-protein] synthase/ fatty-acid synthase | 203 | 2e-016 |
| AT1G74960.1 FAB1 (FATTY ACID BIOSYNTHESIS 1); 3-oxoacyl-[acyl-carrier-protein] synthase/ fatty-acid synthase | 203 | 2e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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