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Information for unigene UN42577

FASTA Sequence
Unigene ID: UN42577Length: 714  SNP
AAAAGGATATGTATTATATTTAGCATTGTTAAGCAAATAAAGTAAAACACTCCAAAGTTTATTTTAAAAAGAACAAATAAAGAACC
GACAATCAGTTCAAACTTGCAGTATCTGAATTGTTGTTATTTGATGACAACAAGACTCAGCATATAACAGCTGAATAATTTTTTTA
GACAGCAAGATAAGAAATGAAACAAGCTTCAAGCAGCAAGAGAGGAACCGGAGTTCTTCTTGCACTCAGACAGCATGTCCATGTAG
AACTGACACTTGCTAATATCGCTTCCATAGCTGCCAATACAATCCTGGAAAGCCTTAGCGTGAATGTCACAGGAGCTGGAGAACAT
GTTGCTTCCGACAGGAGCAGCAGAAGTAGAGGCAGACTCAACAGTTTCATGCTGAATGGTACGTGGGCCCATGACGGAATCAACAG
CCCTATGAGCAACGGCACTTCCGGTTCCAAAAGCCATACCCTGAGCTATGGTGGAACCAATGCCGGAGAACATGCCGCCGCCACCA
CTGGTCGCCTGAGCTGGAGCTGGAGGAGGTGCACGGTTTACAGGTTGAGGAGCTGGGGCACGTGGGCGAGGACGAGGTGCGGATCT
TCCTCCGGAGCTACGGCGACCCATTTTTTACGATTAGGAAGACGACGACGAAATGAGAAAAAAAAATGGATAGAGAGATTAGGAGG
ATAATAGAGATCGCAAATGAGAATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_201245 uncharacterized protein [Arabidopsis thaliana]6506e-066
XP_002864899 hypothetical protein ARALYDRAFT_496648 [Arabidopsis lyrata subsp. lyrata]6434e-065
XP_002532758 conserved hypothetical protein [Ricinus communis]5153e-050
ACU13666 unknown [Glycine max]5063e-049
ACU15062 unknown [Glycine max]5036e-049

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FME9 Emb|CAB89373.16504e-066
B9T3D9 Putative uncharacterized protein5152e-050
C6SWP3 Putative uncharacterized protein5062e-049
A9PDV5 Predicted protein5034e-049
C6T0M8 Putative uncharacterized protein5034e-049

Arabidopsis top hits (Blast detail)Scoree value
AT5G64400.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09570.1); Has 218 Blast hits to 216 proteins in 80 species: Archae - 0; Bacteria - 10; Metazoa - 66; Fungi - 60; Plants - 47; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).6512e-068
AT5G64400.2 unknown protein4998e-051
AT5G09570.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64400.1); Has 141 Blast hits to 141 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 31; Plants - 42; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).4371e-043

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  25%
 
62  25%
 
82  25%
 
92  25%

Unigene MembersMember information