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Information for unigene UN42580

FASTA Sequence
Unigene ID: UN42580Length: 994 SSR 
AATGGTGACGACATCGTCTCGTACCAAATCAAACGGCCCCGTGCTCCGTTCCCAATCTCCATCGGGTCGATTCTGCGGCGCTTACT
CTAATCCCATCCCTTCGTCGTCCTCCTCAGCGTTCGCTTCGTCTACGAGCTCTAGCTTCTCGTCGCCGTCGTCAGCTTTCTTCAGC
AACCACCACCGCGACAATCATCACCACAGCCACCACCGATCCGCCTCTCCCACACGCGTGAATCTATACAAAGCCCAGCCGATCGC
GTTTTCATCGCTCGACAGCAGATCCATCTCCCCGACGAACAGATCCATCTCCGTCTCGAAGAAACCTCAGCCTAGCAGCCACCACC
ACCACCACCACCACAAGATCTCTTCCCCGAGGAGGTGTATGTGCTCTTCCGACGACGCATCCCGGGATCCTTCCGGTGCAGTCTCC
ACAAAAACGTCGCGAATCCGCACGGGCAAGGAGCCGCGTCGTCGTCGTCGTATCCGACGAGCAGTCTGAACATGCGGAGATCCGCG
ATGACGAATTCGCTGGTGAGAATCGGCGGCGTCGAAGGTGAGTGGGTGAGGAGAGCGCTGACGACTCTGATAAGGCCTTCGTCGCA
TCATCTGAGAAGGAGAGCTGCGTATCAGCCTCGTCCGAGTAGGTTATCGATTGTGTCGATGGCCACTGAGTGTAATTGATCTGATC
TGATTATTTAGATTTCAGGTTTGTTCTTTCTCTCCCACAACAGGATTACAGATCTGGAAAGGAAGACTCTAAATCGGCGAGATCTG
CGGTGACTGTGGGAGAGAATCACGACCTCGAAATCGAGTTTTATATAACGAAGATCGAAAGAAGCACACCATCATATAATTTTTTT
GTTTGTTTGTTGGGGTGTAGTAAGATGCGAAATGCATTTGTACATAATCTTACTGTTCTCGCGTCTCTTCTCTTGAAAGAAAATGT
CGGACTCCGAGAAATTGCACCTAGCTTAGAATTGAACTATCAAAATCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871454 hypothetical protein ARALYDRAFT_487941 [Arabidopsis lyrata subsp. lyrata]5074e-049
NP_196670 serine-rich protein-like protein [Arabidopsis thaliana]4895e-047
ABL97972 serine-rich protein [Brassica rapa]4034e-037
XP_002872151 hypothetical protein ARALYDRAFT_489379 [Arabidopsis lyrata subsp. lyrata]3641e-032
NP_197910 serine-rich protein-like protein [Arabidopsis thaliana]3587e-032

Swiss-Prot top hits (Blast detail)Scoree value
P02845 Vitellogenin-21291e-006

TrEMBL top hits (Blast detail)Scoree value
Q9FY56 At5g110904893e-047
A1YMW6 Serine-rich protein4033e-037
Q8L8M8 Serine-rich protein3585e-032
Q93WB2 AT5g25280/F18G18_203585e-032
C6TBX3 Putative uncharacterized protein3083e-026

Arabidopsis top hits (Blast detail)Scoree value
AT5G11090.1 serine-rich protein-related4892e-049
AT5G25280.1 serine-rich protein-related3583e-034
AT5G25280.2 serine-rich protein-related3583e-034

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  50%
 
201  50%

Unigene MembersMember information