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Information for unigene UN42582

FASTA Sequence
Unigene ID: UN42582Length: 728 SSR 
AATTCTTAATCAAATAGCTAGGGCTTTGGAGAGAGAGAGAGAGGGGTTAAAAAAAGGTTTTAATCTTTGTTTAAGAAAAAGTTAAA
ACAAGATTAGGGTTCCATTTCAGAAGCTCAAGATCAACTAGATGGAGGTTAGAGAGAAGAAAGATGATAAAATAGAGATGGAAAGA
AGACAATCATCAGCTAACCAAAACATTCAAGATCATCATCATCATCTTCCTCCGTACACTTACTCCCAAACCGCCGACAAAGAGAA
ACCCACCACCAAAAGAAACGTGTCGGATCCGGATCAAGATCCGAATCCTATTTCTATAGCTCCAGCTCCAAGGTCACACTCTCGGG
CTCAAACAACTTCTCCGACAAGGAACGTGAAATATAGAGAATGCCAAAGGAACCACGCGGCGAACTCCGGCGGACACGTGGTCGAC
GGTTGCGGCGAGTTTATGTCGTCAGGCGAAGAAGGCACGGCGGAGTCGCTTCTCTGCGCCGCATGCGATTGTCACCGGAGCTTCCA
CAGAAAAGAAATCGACGGCATGTTCCTTGTCTAATTCAATAGCTTTGGTCATTCACAGAGACCGCTCGTTAATCGCCACGTGTCTC
CGATCATGATGAGATTTGGCGGTGGTGGCGGAGGAGGAGGAGGAAGAGATCCGGCGGTGGCGGAGTCGTCGACGAGATCTCAACAG
TTCCATCAAGCTTTAAGTGGTGACGAGCGGATCAGTTTCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565436 homeobox protein 24 [Arabidopsis thaliana]7098e-073
XP_002886165 ATHB24 [Arabidopsis lyrata subsp. lyrata]6963e-071
XP_002310240 predicted protein [Populus trichocarpa]3191e-027
XP_002266577 PREDICTED: hypothetical protein [Vitis vinifera]3065e-026
CBI19706 unnamed protein product [Vitis vinifera]2931e-024

Swiss-Prot top hits (Blast detail)Scoree value
Q9SB61 ZF-HD homeobox protein At4g246602212e-017
Q9FKP8 ZF-HD homeobox protein At5g654102076e-016

TrEMBL top hits (Blast detail)Scoree value
Q9ZPW7 Expressed protein7096e-073
B9HF11 Predicted protein3191e-027
C6TDZ3 Putative uncharacterized protein2867e-024
B9MXN6 Predicted protein2714e-022
A5C2J0 Putative uncharacterized protein (Fragment)2599e-021

Arabidopsis top hits (Blast detail)Scoree value
AT2G18350.1 AtHB24 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 24); DNA binding / transcription factor7193e-076
AT3G50890.1 AtHB28 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 28); DNA binding / transcription factor2542e-022
AT1G75240.1 AtHB33 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 33); DNA binding / transcription factor2533e-022
AT1G74660.1 MIF1 (MINI ZINC FINGER 1); DNA binding / transcription factor2363e-020
AT1G14440.1 AtHB31 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 31); DNA binding / transcription factor2246e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
211  50%

Unigene MembersMember information