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Information for unigene UN42584

FASTA Sequence
Unigene ID: UN42584Length: 836 SSR 
TTGGTCTCTCTCTCTCTTGTACACAAGCTCCCGAAGAAACTGAGGGACAGAACTGAATCACTCATGTCTGGTTTATACAACAACAA
CAACTCCTCTTACTTCTCATCTCCGGCAAGAGCTGCTTCTCCTCAGATTAGAAGCACTCCTCCTGAGATCGACAGCTCTCAGTACT
TGACGGAGCTTCTCGCCGAACATCAAAAGCTCACACCTTTTACTCAAGTCTTGCCCATATGCAGCCGCCTGCTCAATCAAGAGATG
TTCAGGGTGTCTGGAATGATGTCTAACCAAGGATTTGGCGATTTTGATAGGCTCAGACACAGAAGTCCCAGTCCTATGGCTTCTTC
TAATCTTATCTCTAACGTTTCTAACACCGGCTTAGGTGGTGGTGGCTGGAACGGCCTTTCTCAGGAGAGACTAAGTGGAACACCTG
GAATGACAATGGATTGGCAAGGTGCACCAGGAAGCCCCAGCTCATACACCGTCAAAAGGATATTGCGTCTGGAGATCCCTGTAGAT
AGCTATCCTAATTTCAATTTTGTTGGTCGACTTCTCGGTCCTAGAGGCAACTCGTTAAAGCGCGTTGAAGCTACTACAGGCTGCCG
CGTGTTTATCAGAGGGAAAGGTTCAATCAAGGATCCGGAAAAGGAAGATAAGTTAAGGGGAAGACCGGGATATGAACACCTGAATG
AGCAGCTTCACATCTTAATAGAAGCAGATCTTCCAGCCAGTATTGTGGAGATACGTCTGCGTCAAGCTCAAGAGATTATAGAAGAG
TTACTTAAGCCCGTGGATGAATCGCAAGATTTCATAAAGAGACAGCAGCTGAGGGAGCTAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_181395 RNA-binding KH domain-containing protein [Arabidopsis thaliana]12198e-132
XP_002323686 predicted protein [Populus trichocarpa]11061e-118
XP_002326275 predicted protein [Populus trichocarpa]10997e-118
XP_002531808 conserved hypothetical protein [Ricinus communis]10961e-117
XP_002268790 PREDICTED: hypothetical protein [Vitis vinifera]10924e-117

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZVI3 KH domain-containing protein At2g3861012194e-133
Q8GYR4 KH domain-containing protein At3g0862010223e-110
Q0WLR1 KH domain-containing protein At4g264756307e-065
Q9FKT4 KH domain-containing protein At5g561406163e-063
Q8GWR3 KH domain-containing protein At1g096605724e-058

TrEMBL top hits (Blast detail)Scoree value
B9IGX2 Predicted protein11067e-119
B9MTT7 Predicted protein10995e-118
B9T0N9 Putative uncharacterized protein10961e-117
C6TMR9 Putative uncharacterized protein10744e-115
C6TB13 Putative uncharacterized protein10654e-114

Arabidopsis top hits (Blast detail)Scoree value
AT2G38610.1 KH domain-containing protein12193e-134
AT2G38610.2 KH domain-containing protein12193e-134
AT3G08620.1 KH domain-containing protein10285e-112
AT4G26480.1 KH domain-containing protein6307e-066
AT5G56140.1 KH domain-containing protein6163e-064

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
212  100%

Unigene MembersMember information