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Information for unigene UN42586
| FASTA Sequence |
| Unigene ID: UN42586 | Length: 1061 |
SSR | | TCCCCCTTGCGCCGATCGTCTCCTCCGCCTCGTCAAATATTCTCCTCTCACCGGGCTTTGAGTTGCACACCAGATGTCTGTTGATC
TCTGCAAGAAGAACCCATCTTTTCTCTGGTGCGCCTGTGGTTACATGAGCAGGGGGAGGTTGTGGTGCTTTCATATCATCTTGTTT
AGGCACTGGACTTAGTTCTTCTCTCTCTCACCCTCTTTTCTCTCTCTCTCTCTCTCTTCTCTTTTCTTTTTAGCTTCTCTGCAATT
TTCTGTTTGATTTGGTTACAAAGTATTCGCTTTTTTAGCTTCTCTGCAATTTTCGCAAAGTTTTCCCCTTTGGATCTCTCTCCCAA
TGGGGAAAACTCAGCTGGCTCCTGGATTCCGGTTTCACCCCACTGATGTCGAGCTCGTGAGATACTACTTGAAGAGGAAGGTGTTG
GGGAAAAAGCTCCTCGTTGATGCAATTGCTGAGCTCGACATTTACAATTTCGAACCCTCTGATTTACCTGATAAGTCGTATATAAA
GAGTGGGGATCTGAAGTGGCACTTCTTCTGCCCAAGGGAAAAGAAATATTCAACTGGAGTTAGGGCAAACCGTGCTACTGCCTGTG
GTTACTGGAAGACCACAGGGAAGGAGAGAGATGTTCTGTGCAATGGGGAAGTTGCGGGAAAGATTAAGACTCTGGTTTATCACTTT
GGTAAATCACCTCGTGGGGAGCGGACTGATTGGGTTATGCATGAGTACAGGCTTGAAGACAAGGTTCTGACACAGAAGAATGTTCC
TCAGGATACTTATGTGCTGTGTGTTCTATTCAAGAAAGATGGACCGGGACCTAGAAATGGAGCTCAGTACGGAGCTCCGTTTAAGG
ATGAGGACTGGAGCGATGAGGAACAGGATACTGGTGTTCGTGCTACCAACGCTCCCGCAGTTCTTCAGGGAGAAACCAGTCTTGTT
GTGGCTTCCTCGCATGTCCCTGATAAGGATTGTTTTGTTGGCATGATAGCTGAATCGTGCGTCTCTGACTTCCTACAAGCTACAAC
AACTGCCACCGGTCTTCCGCAACTGAATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873395 hypothetical protein ARALYDRAFT_487745 [Arabidopsis lyrata subsp. lyrata] | 1025 | 4e-109 |
| NP_196495 NAC domain containing protein 82 [Arabidopsis thaliana] | 1024 | 5e-109 |
| NP_201211 NAC domain containing protein 103 [Arabidopsis thaliana] | 867 | 8e-091 |
| XP_002866590 ANAC103 [Arabidopsis lyrata subsp. lyrata] | 867 | 8e-091 |
| ADL36796 NAC domain class transcription factor [Malus x domestica] | 720 | 9e-074 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q84K00 NAC domain-containing protein 78 | 603 | 1e-061 |
| Q7GCL7 NAC domain-containing protein 74 | 415 | 9e-040 |
| O49255 NAC domain-containing protein 29 | 398 | 8e-038 |
| Q39013 NAC domain-containing protein 2 | 383 | 5e-036 |
| Q93VY3 NAC domain-containing protein 72 | 379 | 1e-035 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FY82 AT5G09330 protein | 1024 | 3e-109 |
| Q9FMJ1 Similarity to NAM | 867 | 5e-091 |
| B9RU40 Transcription factor, putative | 684 | 9e-070 |
| B9HEK0 NAC domain protein, IPR003441 | 682 | 2e-069 |
| Q9M4U3 NAC1 | 677 | 6e-069 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G09330.1 anac082 (Arabidopsis NAC domain containing protein 82); transcription factor | 1024 | 2e-111 |
| AT5G09330.2 anac082 (Arabidopsis NAC domain containing protein 82); transcription factor | 1024 | 2e-111 |
| AT5G09330.3 anac082 (Arabidopsis NAC domain containing protein 82); transcription factor | 1024 | 2e-111 |
| AT5G09330.4 anac082 (Arabidopsis NAC domain containing protein 82); transcription factor | 1024 | 2e-111 |
| AT5G64060.1 anac103 (Arabidopsis NAC domain containing protein 103); transcription factor | 867 | 3e-093 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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