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Information for unigene UN42592
| FASTA Sequence |
| Unigene ID: UN42592 | Length: 916 |
SSR | | GGCTGCTCTCTTTCTATATCTCTCTCTCTCTTATAATTCCACTTCGCATTCGAGCAAAGCTCATTACTGATTCGTTCAAGATTTAA
ACCAGACCCATCTAAGGGATCTGGAACAGGCTCCGTCTTCTTGTATTGCTCTGATCAACAGAGGAATAACATAAAAAAAATGGAGT
CTTTCATCTCCAGATCCACCTCCACAGCCTCCAAGTTGAATTTCTTGGCCGTAGGGATCGTCTTCTTGATTTCTTCCTCTTCTTTT
ACTTCCACAGAAGCATATGATGCGCTAGATCCAGAAGGCAACATTACAATGAAATGGGATGTCATGAGCTGGACTCCTGATGGCTA
TGTTGCTGTGGTTACCATGTTCAACTTCCAAAAGTACAGACACATTCCATCTCCAGGATGGACTTTAAGTTGGAAATGGGCTAAGA
AGGAAGTTATATGGAGTATGGTCGGAGCTCAAACAACCGAACAAGGTGATTGTTCAAAGTACAAAGGAAACCTACCGCATTGTTGT
AAGAAAGATCCAACGGTTGTAGATTTGCTCCCGGGGACTCCTTACAACCAGCAGATTGCAAACTGCTGCAAAGGCGGTGTCATGAA
CTCGTGGGTTCAAGACCCTGGCACCGCAGCTAGCTCCTTCCAGATCAGCGTTGGCGCTGCTGGAACCACGAACAAAACCGTCCGCG
TGCCGAGAAACTTCACTCTCATGGGCCCTGGTCCTGGCTACACTTGCGGTCCTGCTAAGATTGTGAGACCAACCCAGTTTGTTACT
CCTGACACACGCAGAACCACTCAGGCCATGATGACATGGAACATAACGTGCACATACTCTCAGTTCCTCGCTCAGAGAACTCCAAC
CCTGTTGCGTTTCTTTGTCTTCTTTTTACACGAAACCATTGTGGGATGTCCAACTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568930 protein COBRA [Arabidopsis thaliana] | 1240 | 3e-134 |
| AAM62930 phytochelatin synthetase-like protein [Arabidopsis thaliana] | 1236 | 1e-133 |
| XP_002866404 hypothetical protein ARALYDRAFT_496244 [Arabidopsis lyrata subsp. lyrata] | 1231 | 4e-133 |
| XP_002514629 Protein COBRA precursor, putative [Ricinus communis] | 1074 | 6e-115 |
| XP_002264600 PREDICTED: hypothetical protein [Vitis vinifera] | 1066 | 5e-114 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94KT8 Protein COBRA | 1240 | 2e-135 |
| Q9SRT7 COBRA-like protein 1 | 965 | 1e-103 |
| Q60E70 COBRA-like protein 3 | 956 | 1e-102 |
| Q8L8Q7 COBRA-like protein 2 | 953 | 3e-102 |
| Q6Z4G8 COBRA-like protein 1 | 943 | 4e-101 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RLL0 Protein COBRA, putative | 1074 | 4e-115 |
| A9P983 Predicted protein | 1055 | 7e-113 |
| A5BRW4 Putative uncharacterized protein | 1053 | 1e-112 |
| B9SYD1 Protein COBRA, putative | 1019 | 1e-108 |
| C6THH0 Putative uncharacterized protein | 981 | 3e-104 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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